Gene Information

Name : JDM601_0489 (JDM601_0489)
Accession : YP_004521743.1
Strain : Mycobacterium sp. JDM601
Genome accession: NC_015576
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 517849 - 518565 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence : 
GTGGTGCTGGAAGCGCGCAAACTCAACAAACAGTTCGGTCACGGCGATACCGCGACGCCGGTATTGCGGAACGTCGATAT
CCAGATAACCCGCGGCGAATTCGTCGCCATGGTCGGCCCGTCCGGCTCGGGCAAGTCGACCCTGCTGAGCATCCTCGGCC
TGCTGGACCTGCCGACCTCCGGAGATGTGCTCATCAACGGCCACAGTGTCTCGCAGCTGTCGCGCCGGCAGTTGGCCGCC
GTCCGATGCCAAACCCTCGGCTACGTATTCCAGGCGTTCAACCTTCTGGCGGGCCTGTCGGTCGTGGAGAACGTCATGCT
GCCGGGCCTACTGGCGGGCAAATCCGGCCGCTCCCAGCATGCCCACGCGATGGGCCTGCTCGACCAGGTGGGGCTGGCCG
CCAAATCCAAGCGGGTCCCGTCGGAGTTGTCCGGCGGTGAACAACAGCGGGTCGCCGTTGCGCGGGCGCTTTTCATGAAG
CCAGACGTCATTCTGGCCGATGAGCCGACCGGCAACCTGGACACCGTTAACGGGCAGCGGGTTATTGACGCCCTGTACAA
CCTGAATGCCGCCGGCCAGACAATTGTCCTGGTGACCCACGACCGGAAAATAGCCGACGACGCTCCCCGGCTGGTTTCAC
TTCTCGACGGTGAAATCGAGACCGACAGCGGAATGGCTCATGCGCCCGACAATGTGACATGGCTCGCGGGACATTAG

Protein sequence : 
MVLEARKLNKQFGHGDTATPVLRNVDIQITRGEFVAMVGPSGSGKSTLLSILGLLDLPTSGDVLINGHSVSQLSRRQLAA
VRCQTLGYVFQAFNLLAGLSVVENVMLPGLLAGKSGRSQHAHAMGLLDQVGLAAKSKRVPSELSGGEQQRVAVARALFMK
PDVILADEPTGNLDTVNGQRVIDALYNLNAAGQTIVLVTHDRKIADDAPRLVSLLDGEIETDSGMAHAPDNVTWLAGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-24 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JDM601_0489 YP_004521743.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-38 48
JDM601_0489 YP_004521743.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-31 47
JDM601_0489 YP_004521743.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-33 43
JDM601_0489 YP_004521743.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-28 41