Gene Information

Name : JDM601_0444 (JDM601_0444)
Accession : YP_004521698.1
Strain : Mycobacterium sp. JDM601
Genome accession: NC_015576
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 465153 - 466676 bp
Length : 1524 bp
Strand : +
Note : -

DNA sequence :
ATGACCGTCTTCGCACGTCCGGGCAGCGCGGCGGCGCTGATGAGCTTTGAGTCGCGCTACGGCAACTTCATCGGCGGGCA
GTGGGTGGCGCCGGTCGGTGGTGAGTATTTCGAGAACATCACCCCGGTCACCGGTCAGGTGTTCTGCGAGGTCGCGCGTT
CGACCGCGGCGGATATCGAGCTGGCTTTGGATGCCGCGCATGCGGCGGCGCCGGCGTGGGGTAAGACGTCCCCGGCCGAG
CGGGCGGCGGTGCTCAACGCGATTGCCGATCGCATCGACGCGCATCGCGAACAGCTCGCGGTGGCCGAGGTGTGGGACAA
CGGCAAGCCGATCCGGGAGGCGCTGGCCGCCGATATCCCGCTGGCGGCCGATCATTTCCGCTACTTCGCGGCGGCGATCC
GCACCCAGGAGGGCGCGTTGAGCCAGCTCGACGACGACACCGTGGCCTATCACTTCCACGAGCCGCTGGGGGTGGTGGGC
CAGATCATCCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAGCTGGCCCCGGCATTGGCGGCCGGCAATGCGGTGGT
GCTCAAGCCGGCCGAGCAGACCCCGGCCTCGATCCTGTACCTGCTCAGCCTGATCGGTGAGCTGCTGCCGGCCGGGGTGG
TCAACGTGGTCAACGGTTTCGGGGTCGAGGCCGGCAAGCCGCTGGCGTCGAGCAACCGGATCGCCAAGATCGGCTTCACC
GGTGAGACCACCACGGGGCGGCTGATCATGCAGTACGCCAGTCACAACATCATCCCGGTCACTTTGGAGCTGGGCGGCAA
GAGCCCCAACATCTTCTTCGCCGACGTGCTGGCGGCCAATGACGACTTCCAGGACAAGGCGCTGGAGGGATTCGCCGGGT
TCGCTCTCAACCAGGGCGAGGTGTGCACGTGTCCGTCGCGGTCGCTGATCCAGGCCGAGATCTACGACGAGTTTCTGGAG
TTGGCCGCGATCCGCACCAAGGCGATCCGCCAAGGCGACCCGCTGGACAGCACCACGATGGTCGGGGCGCAGGCCTCCAA
TGACCAGCTGGAGAAGATCCTGTCCTACATCGAGATCGGTAAGGCCGAAGGCGCCAAGGTCATCACCGGCGGCCAGCGCG
CCGAGTTGGGTGGGGAACTGTCCGGCGGTTACTACGTGCAGCCGACGATCTTCGCCGGCCACAACAACATGCGGATCTTC
CAGGAGGAGATCTTCGGCCCGGTGGTCTCGGTGGGCTCGTTCAGTGACTACGGCGACGCCATCGCCCAGGCCAACGACAC
CCTCTACGGGCTGGCCGCCGGGGTGTGGAGCCGCGACGGCAACACCGCCTACCGGGCCGGCCGTGACATTGCGGCCGGCC
GGGTCTGGGTCAACTGCTACCACGCCTACCCCGCGCACGCCGCGTTCGGCGGCTACAAGCAGTCCGGGATCGGCCGGGAG
AACCACAAGATGGTGCTCGATCACTACCAGCAGACCAAGAACCTGCTGGTGTCCTACTCGGAGACCGCGACGGGATTGTT
CTGA

Protein sequence :
MTVFARPGSAAALMSFESRYGNFIGGQWVAPVGGEYFENITPVTGQVFCEVARSTAADIELALDAAHAAAPAWGKTSPAE
RAAVLNAIADRIDAHREQLAVAEVWDNGKPIREALAADIPLAADHFRYFAAAIRTQEGALSQLDDDTVAYHFHEPLGVVG
QIIPWNFPLLMAAWKLAPALAAGNAVVLKPAEQTPASILYLLSLIGELLPAGVVNVVNGFGVEAGKPLASSNRIAKIGFT
GETTTGRLIMQYASHNIIPVTLELGGKSPNIFFADVLAANDDFQDKALEGFAGFALNQGEVCTCPSRSLIQAEIYDEFLE
LAAIRTKAIRQGDPLDSTTMVGAQASNDQLEKILSYIEIGKAEGAKVITGGQRAELGGELSGGYYVQPTIFAGHNNMRIF
QEEIFGPVVSVGSFSDYGDAIAQANDTLYGLAAGVWSRDGNTAYRAGRDIAAGRVWVNCYHAYPAHAAFGGYKQSGIGRE
NHKMVLDHYQQTKNLLVSYSETATGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-123 62
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-130 61
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-130 61
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-130 61
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-130 61
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-59 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
JDM601_0444 YP_004521698.1 aldehyde dehydrogenase VFG0082 Protein 1e-123 62