Gene Information

Name : aspC (JDM601_0329)
Accession : YP_004521583.1
Strain : Mycobacterium sp. JDM601
Genome accession: NC_015576
Putative virulence/resistance : Unknown
Product : aspartate aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 344803 - 346080 bp
Length : 1278 bp
Strand : -
Note : -

DNA sequence :
GTGACCGCTCACCAGTTGCCTCACCAGATGCCCTGGCCTGCCATCGGCAGCCAGCTGCGGCAGCGGACGTTCGCGCAGTC
GACCAAACTGCAGGACGTTCTCTACGAGATCCGCGGTCCGATCCATGCCCAGGCCGCCCGGATGGAGGCCGAGGGGCACC
GCATCCTCAAGCTCAACATCGGCAACCCGGCGCCGTTCGGGTTCGAGGCGCCCGACGTGATCATGCGCGACATGATCCAG
GCGTTGCCGCACGCGCAGGGATATTCAGATTCGCAGGGCATCCTGCCAGCGCGGCGCGCGGTGGTCACCCGCTACGAACT
GGTCGAGGGGTTCCCCCGCTTCGACGTCGACGACGTCTATCTGGGCAACGGGGTCTCCGAGCTGATCAGCATGGTGCTTC
AGGCACTGCTGGACAACGGCGATCAGGTGCTGATCCCGGCTCCGGACTATCCGCTGTGGACAGCGTCGACGTCGCTGGCC
GGTGGAACGCCGGTGCACTATCTGTGCGACGAGACCCAGGGCTGGCAACCCGACATCGCCGACATGGAATCGAAGATCAC
CGAGCGGACCAAGGCGCTGGTGGTGATCAACCCGAACAACCCGACCGGTGCCGTCTACGGGCGGGAGGTGCTCAGCCAGA
TCGCCGAGTTGGCCCGCAAGCATCAACTCCTGCTGCTGGCCGACGAGATCTACGACAAGATCCTCTACGACGACGCCGAG
CACACGAATATGGCCGCCCTGGCGCCGGATCTGCTGTGCCTGACCTTCAACGGGTTGTCGAAGGCCTACCGGGTGGCGGG
TTACCGGGCCGGCTGGGTGGCGATCACCGGCCCCAAGGAGCACGCGACCAGTTTCCTGGAGGGCATCAATCTGCTCGCCA
ACATGCGGCTGTGCCCGAATGTGCCGGCGCAGCACGCTATTCAGGTGGCATTGGGCGGCCATCAGAGCATCGACGATCTG
GTACTGCCGGGCGGTCGACTGCTCGAACAACGTGACGTGGCCTGGAGCAAGCTCAATGAGATTCCCGGCGTCTCCTGCGT
CAAGCCGAGTGGTGCACTCTACGCGTTCCCGCGGCTCGACCCCGAGGTCTACCCGATCCAGGACGACGAGCAGCTGGTCT
TGGATCTGCTGCTGCAGGAGAAGATCCTGGTGACTCAGGGCACCGGGTTCAACTGGCCAGCGCCGGACCATCTGCGCATC
GTGACGCTGCCGTGGGCCCGCGATTTGTCCGGCGCCATCGAACGGCTGGGCAACTTCTTGGTGGGCTACCGGCTGTAG

Protein sequence :
MTAHQLPHQMPWPAIGSQLRQRTFAQSTKLQDVLYEIRGPIHAQAARMEAEGHRILKLNIGNPAPFGFEAPDVIMRDMIQ
ALPHAQGYSDSQGILPARRAVVTRYELVEGFPRFDVDDVYLGNGVSELISMVLQALLDNGDQVLIPAPDYPLWTASTSLA
GGTPVHYLCDETQGWQPDIADMESKITERTKALVVINPNNPTGAVYGREVLSQIAELARKHQLLLLADEIYDKILYDDAE
HTNMAALAPDLLCLTFNGLSKAYRVAGYRAGWVAITGPKEHATSFLEGINLLANMRLCPNVPAQHAIQVALGGHQSIDDL
VLPGGRLLEQRDVAWSKLNEIPGVSCVKPSGALYAFPRLDPEVYPIQDDEQLVLDLLLQEKILVTQGTGFNWPAPDHLRI
VTLPWARDLSGAIERLGNFLVGYRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-142 73
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-142 73
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 3e-142 73
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-142 73