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Name : JDM601_3121 (JDM601_3121) Accession : YP_004524375.1 Strain : Mycobacterium sp. JDM601 Genome accession: NC_015576 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 3317885 - 3319117 bp Length : 1233 bp Strand : - Note : - DNA sequence : ATGGGGTTGACGTTGCCTAAGCGCAAAGCGGTGACGGAGACGATCGCAGTCCGTTACATCCTGGCGAGCAAGCGCGAGAA GAGTCGGATTTTAGACGAGTTGTGCGCCACGACGGGGTGGCATCGCAACCATGCCCGTAAGGCGCTGAAGTCGGCGCTGC AGCCCAAGATCGTCACCGCACGCAGTCCGCGACCAGTGAAGTATGGCGACGATGTCATTGCCGCGCTGGTGCTGTGCTGG ACAGTGCTGGGGATGCCGGCCGGCAAGCGGCTGGCGCCAATGCTCGGTGAGCTGGTCGGCATTCTGCGGCATTTTCGGGA GCTGACGATCGACGAGGGCACCGCCGAACTGTTGGTGTCGATGTCGGCGGCCACCATCGATCGGCGCTTGGCTCCAGAGC GAGCCAAGCACCGCCTGCGAGGGCGTGCCGGAACCAAGCCGGGATCGCTGCTGAAAAGTCAGATCCCGGTGCGGACCTGG GCCGAGTGGGATGACGCCCGACCCGGGTTCGTTGAGATCGACCTGGTCTGGCATGACGGCGGTATCCGGGGCGGAGGTCA CGCATTCACCCTGACGGTCACCGACATCGCGACCGGCTGGACTGAGAACCGTTCCGTGCCGGAAAGAACCAGCAAATGCG TGCTGGCAGCACTCAACGACATCGCCCGTGCGATGCCGTTCCCGGTCCTGGGCGTGGACTCTGACAACGGATCCGAGTTC ATCAACGACGACCTGTTTCGGTGGTGCCAACGCCACAAGATCACCTTCACTCGAGCACGGCCGGGCAACAAGAACGACGG TTGTCACGTTGAGCAGAAAAACTGGTCAGTGGTACGCAGCATGGTGGGCTATCACCGCTACGATACCGCCGCAGAAGTGT TGCTGCTCAACGAGATCTGGCACTTGCAATCCAAGCTGACCAACTACTTCTACCCCCAGCAGAAGCTGATCTCCAAGGTC CGCAAAGGCGCCAAGATATCCAAGAAACACGACAAAGCCACTACCCCGTTTCACCGCGTGATCGATCACCCCACCGCGAC GGTGGAACGCATCGTCGCGTTGACCCGCGCCTACTCGTTGATCAATCCGGCTGCCACCCAGCGCCAGGCCCAAGCTCTGA CCACCCGACTATTCAGCCTCACCACCACCAAGGCCGGTCCCGCCGCTGAAGCCCAGATCAACAAGCGCGCACGATTACGT GAGGCAACGAATACCCCTACCCGCGCATCTTGA Protein sequence : MGLTLPKRKAVTETIAVRYILASKREKSRILDELCATTGWHRNHARKALKSALQPKIVTARSPRPVKYGDDVIAALVLCW TVLGMPAGKRLAPMLGELVGILRHFRELTIDEGTAELLVSMSAATIDRRLAPERAKHRLRGRAGTKPGSLLKSQIPVRTW AEWDDARPGFVEIDLVWHDGGIRGGGHAFTLTVTDIATGWTENRSVPERTSKCVLAALNDIARAMPFPVLGVDSDNGSEF INDDLFRWCQRHKITFTRARPGNKNDGCHVEQKNWSVVRSMVGYHRYDTAAEVLLLNEIWHLQSKLTNYFYPQQKLISKV RKGAKISKKHDKATTPFHRVIDHPTATVERIVALTRAYSLINPAATQRQAQALTTRLFSLTTTKAGPAAEAQINKRARLR EATNTPTRAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDBH8_0909 | YP_005160001.1 | integrase catalytic subunit | Not tested | Not named | Protein | 5e-44 | 43 |
| CDBH8_0921 | YP_005160013.1 | integrase catalytic subunit | Not tested | Not named | Protein | 3e-48 | 42 |
