Gene Information

Name : ureC (JDM601_0272)
Accession : YP_004521526.1
Strain : Mycobacterium sp. JDM601
Genome accession: NC_015576
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : -
Position : 290931 - 292649 bp
Length : 1719 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTCGATCTCCCGGCGGGACTACGTCTCGCTGTACGGTCCCACCACCGGTGATCGGTTCCGGTTGGCCGACACCGA
ACTGATCGCGCAGGTCGAGGACAGCCTGCTCACCCCGGGCGAGGAGTTGGTGTTCGGTGGCGGTAAGTCGATCCGGGACG
GCATGGGCCAGACCCCGGGGATCACCAACGCCGACGGCGCCCTGGACCTGGTCATCACCTCGGTGATCGTGATGGACCCG
ATCATCGGAATCATCAAGGCCGACATCGGAATTCGTAACGGTCGGATCGTCGGGATCGGCCAGGCAGGCAACCCCTACGT
GCAAGACGGGGTGGACCCGGCGCTGATCGTCGGGACCGGCACCCAGGTGATCGCCGGCGAGGGCCTGGTGGCCACTGCCG
GCGCGGTCGACACCCACGTGCACTTCATCTCCCCCGAACAGGTCAAAGACGGCCTGTCCAGCGGGGTCACCACCCTGCTC
GGCGGCGGGACCGGACCCGAGGACGGGGCACGGGGCACCAACACCACCCCGGGCGCGGGCAACATCACCCGGATGCTGCA
GGCCACCTCCGCCTACCCGGTCAACGTGGGCTTCCTCGCCAAGGGCAACAGCAGCCGACCCGAGGTGCTCATCGAGGAGG
TCGAGGCCGGCGCCTGCGGTTTCAAGGTGCACGAGGACTGGGGATCCACCCCGTCGGTGATGGATTGCTGCCTGAACGTG
GCCGACGACTACGACGTGCAGGTCGCGATCCACACCGACACCATCAACGAGTCCGGCTACCTCGCCGACACGCTCGCCGC
CATCAACGGGCGGGTGGTGCACGCCTACCACATCGAGGGCGCCGGCGGCGGCCACGCCCCGGACGTGATGGCGATGGCCG
CGATGCCCAATGTGCTGCCGTCCTCGACGAACCCCACCCGGCCGTACACCACCGACACCGCCGACAACCTGTTCTACATG
ACTGCGGTGACACACAACCTCAATCCGCACGACCCGGTCGACAACGCGTTCGTGCAGTCCCGGATCCGCACCGGCACCGA
GGCCGCCGAGGACGTGCTGCAGGACCTGGGTGTGGTGTCGATGTACACCTCGGACTCGCAGGCGATGGGCCGGATGTCCG
ACACCATCACCACCGCGTGGCGCACCGCCGACAAGATGAAGCAGCTGACCGGCAAGCTGGCCGGCGACCCGGACGAACAC
GACAACAACCGGATCCTGCGCTATCTCGCCAAATACACGATCAACCCGGCGCTCACCCACGGGGTAGCCCATCTGGTGGG
GTCGCTGGAACCGGGCAAGATCGCCGACATCGTACTGTGGCCGACCGCGACATTCGGGGTACGGCCCAAGCTGGTGCTCA
AGGGCGGCGCGGTGGCGCGGGCTGCCATCGGCGACCCGTGCGGCTCGATTCCCACCACCGAGCCGGTGCTGCTGCGACCG
ATGTACGCCAGTGAGCCGGACCTGGCGCGGCGCACCTCGATGACGTTCATGTCCGATGCCGCGGTGAGCGCCGGGGTGCC
CGAGCGGATCGGGCTCGACCGCTGGGTCGAACCGGTCCGCGGCTGCCGCACCGTCGGCAAGCCGCAGATGGTGCGCAATG
ACGCCATGCCGGAGATCCGGATCGACCCGAACACCTACGACGTCTACCTGGACGGGACGCTGGCCACGGTGCCGGCGGTC
GACCGGGTGGCGATGTCGCAGTTGTACTACGTGGTCTGA

Protein sequence :
MSSISRRDYVSLYGPTTGDRFRLADTELIAQVEDSLLTPGEELVFGGGKSIRDGMGQTPGITNADGALDLVITSVIVMDP
IIGIIKADIGIRNGRIVGIGQAGNPYVQDGVDPALIVGTGTQVIAGEGLVATAGAVDTHVHFISPEQVKDGLSSGVTTLL
GGGTGPEDGARGTNTTPGAGNITRMLQATSAYPVNVGFLAKGNSSRPEVLIEEVEAGACGFKVHEDWGSTPSVMDCCLNV
ADDYDVQVAIHTDTINESGYLADTLAAINGRVVHAYHIEGAGGGHAPDVMAMAAMPNVLPSSTNPTRPYTTDTADNLFYM
TAVTHNLNPHDPVDNAFVQSRIRTGTEAAEDVLQDLGVVSMYTSDSQAMGRMSDTITTAWRTADKMKQLTGKLAGDPDEH
DNNRILRYLAKYTINPALTHGVAHLVGSLEPGKIADIVLWPTATFGVRPKLVLKGGAVARAAIGDPCGSIPTTEPVLLRP
MYASEPDLARRTSMTFMSDAAVSAGVPERIGLDRWVEPVRGCRTVGKPQMVRNDAMPEIRIDPNTYDVYLDGTLATVPAV
DRVAMSQLYYVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-126 53
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 4e-125 53
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 4e-125 53
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-126 53
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-126 53
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-126 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_004521526.1 urease subunit alpha VFG0270 Protein 4e-129 49