Gene Information

Name : tpx (JDM601_2024)
Accession : YP_004523278.1
Strain : Mycobacterium sp. JDM601
Genome accession: NC_015576
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2201105 - 2201569 bp
Length : 465 bp
Strand : +
Note : -

DNA sequence :
GTGACGACGGCCGGAGAACTACCCGCGGTTGGGGATGCGGCGCCCGCGTTCTCGCTGACCGGAACGGACCTCGGTGCGGT
CGAGAGTGCTCAGTTCGGCGGCAAGCCGCTATTGCTGAACATCTTCCCGTCCATCGACACCCCGGTGTGTGCGACGAGCG
TGCGGACGTTCAACGAGCGCGCCGCCGCCAGCGGTCTTACCGTGGTGTGCGTGTCGAACGATCTGCCGTTCGCGCAGAAG
CGCTTCTGCGGTGCGGAGGGCATCGAGAACGTGACGACGGCCTCGGCCTTCCGCTCGGGCTTCGGCGGTGACTACGGGGT
GACCATCGCCGACGGTCCGATGGCTGGCCTGCTTGCGCGTGCCGTGGTGGTCATTGACGCGGACGGCAAGGTTGCCTACA
CCGAGCTGGTACCGGAGATCGCCAGCGAGCCCGACTACGACGCGGCCATCGCAGCACTGGGCTGA

Protein sequence :
MTTAGELPAVGDAAPAFSLTGTDLGAVESAQFGGKPLLLNIFPSIDTPVCATSVRTFNERAAASGLTVVCVSNDLPFAQK
RFCGAEGIENVTTASAFRSGFGGDYGVTIADGPMAGLLARAVVVIDADGKVAYTELVPEIASEPDYDAAIAALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 7e-31 46
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 4e-31 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 5e-31 46
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-31 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_004523278.1 thiol peroxidase VFG0087 Protein 2e-31 46