Gene Information

Name : MSWAN_0706 (MSWAN_0706)
Accession : YP_004519541.1
Strain : Methanobacterium sp. SWAN-1
Genome accession: NC_015574
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 767736 - 767930 bp
Length : 195 bp
Strand : -
Note : KEGG: mja:MJ_0272 repressor protein YorfE; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence : 
ATGAAAAATAAATTAAAAGTATATCGAGCAATGCATGACCTAACTCAAGAGGAATTAGCAAAAGAGCTCAAAGTAACTAG
ACAAACTATCATTGCTATTGAAAAGCTTAAATATGACCCTTCGTTAGGTCTGGCCTTTAAAATAGCCAGATTTTTTAAAG
TACAGATAGAAGATATCTTCCAGGATGATGAATGA

Protein sequence : 
MKNKLKVYRAMHDLTQEELAKELKVTRQTIIAIEKLKYDPSLGLAFKIARFFKVQIEDIFQDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-08 55
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-08 55
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-12 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSWAN_0706 YP_004519541.1 XRE family transcriptional regulator VFG2168 Protein 6e-09 55
MSWAN_0706 YP_004519541.1 XRE family transcriptional regulator VFG2175 Protein 6e-09 55