Gene Information

Name : MSWAN_0368 (MSWAN_0368)
Accession : YP_004519212.1
Strain : Methanobacterium sp. SWAN-1
Genome accession: NC_015574
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 409620 - 409820 bp
Length : 201 bp
Strand : +
Note : KEGG: mfs:MFS40622_0470 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence :
ATGAAGAACAAGCTGAAGGTCTACAGGGCCATGAACGATATTACCCAGGAAAAACTTGCAAAAGAGCTTGGAGTAACCAG
ACAGACAATAATAGCAATAGAAAAGGATAAATATGATCCTTCATTAAGTTTGGCATTCAAAATAGCGAAATTATTCCAGG
TTAAAATAGAAGACATTTTCTTATATGAAGAAAAGGAATAA

Protein sequence :
MKNKLKVYRAMNDITQEKLAKELGVTRQTIIAIEKDKYDPSLSLAFKIAKLFQVKIEDIFLYEEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-13 57
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 8e-08 51
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 5e-08 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSWAN_0368 YP_004519212.1 XRE family transcriptional regulator VFG2175 Protein 2e-08 51
MSWAN_0368 YP_004519212.1 XRE family transcriptional regulator VFG2168 Protein 2e-08 51