Gene Information

Name : MSWAN_2335 (MSWAN_2335)
Accession : YP_004521141.1
Strain : Methanobacterium sp. SWAN-1
Genome accession: NC_015574
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2423844 - 2424044 bp
Length : 201 bp
Strand : -
Note : KEGG: mmg:MTBMA_c17140 transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence :
ATGAAGACTAATATTAAAAAGTATCGCTTGGAACTGAACTTAACTCAGGAAGATTTGGCTAAACTGGTAGATGTAACCAG
ACAGACGATCATAGCATTAGAACAGGGAAAATACAATCCTTCCCTGATTTTAGCCTACAGAATTACCAAAGCCCTCCAGA
AACAATGTATTGAAGAAGTATTCGATCTTGAGAATTTGTAA

Protein sequence :
MKTNIKKYRLELNLTQEDLAKLVDVTRQTIIALEQGKYNPSLILAYRITKALQKQCIEEVFDLENL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-04 43
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 7e-05 43
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSWAN_2335 YP_004521141.1 XRE family transcriptional regulator VFG2175 Protein 3e-05 43
MSWAN_2335 YP_004521141.1 XRE family transcriptional regulator VFG2168 Protein 3e-05 43