Gene Information

Name : MSWAN_1801 (MSWAN_1801)
Accession : YP_004520613.1
Strain : Methanobacterium sp. SWAN-1
Genome accession: NC_015574
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1891020 - 1891901 bp
Length : 882 bp
Strand : -
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: mst:Msp_0072 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein

DNA sequence : 
ATGTTGCATGGTACTGAGGTTTTGAAGAAGGGTTTTGCTAGTATGACTAAGGGTGGGGTTATTATGGATGTTGTGAATGC
TGATCAGGCGGCTGTTGCTGAGGAGGCGGGTGCTGTTTCTGTTATGGCTTTGGAGCGTGTGCCTGCTGATATTCGGGCTG
CTGGTGGTGTGGCTCGTATGGCGGATCCGTCTAAGGTTTTGGAGATTATGGATGCGGTGTCTATTCCGGTTATGGCTAAG
GTTCGTATTGGTCATTTTGTTGAGGCTCAGGTTATTCAGTCTCTTGGTGTTGATATGATTGATGAGAGTGAGGTGCTTAC
ACCTGCCGATGAGAAATATCATATTGATAAGAAGCAATTCATCATACCTTTTGTGTGTGGTGCACGTAACTTGGGTGAAG
CTTTGAGGAGGATTAATGAAGGTGCTGCTATGATCCGTACTAAAGGTGAAGCTGGAACAGGAAATGTTGTAGAAGCTGTA
CGGCATATGCGTGTGATCCAGAGCACCATCCGTGAACTCAAAGACAAAACCGAGGAAGAATTATGGGCTGTGGCTCGTGA
AGAAGAAGCAACACTAGAACTCGTCAAAGAAACAGCAAAACAAGGAAGGTTACCAGTTGTGAACTTCGCAGCCGGCGGTG
TGGCCACACCAGCAGATGCAGCACTCATGATGCAATTAGGTGCTGATGGTGTTTTTGTTGGAAGTGGAATATTCAAATCA
GAAAACCCTGAACTCGTTGCAAAAGCAATAGTACAAGCCACAACCCATTATCAAGATGCGGAATTATTGGCTAAGGTTTC
CACTAATCTTGGAGAGGCTATGCCTGGTTTGGAGATAAGTGAAATACCAGAAAACGAAAGACTACAAGAAAGAGGATGGT
AA

Protein sequence : 
MLHGTEVLKKGFASMTKGGVIMDVVNADQAAVAEEAGAVSVMALERVPADIRAAGGVARMADPSKVLEIMDAVSIPVMAK
VRIGHFVEAQVIQSLGVDMIDESEVLTPADEKYHIDKKQFIIPFVCGARNLGEALRRINEGAAMIRTKGEAGTGNVVEAV
RHMRVIQSTIRELKDKTEEELWAVAREEEATLELVKETAKQGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS
ENPELVAKAIVQATTHYQDAELLAKVSTNLGEAMPGLEISEIPENERLQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 5e-70 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-70 66
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-70 65