Gene Information

Name : MSWAN_1314 (MSWAN_1314)
Accession : YP_004520132.1
Strain : Methanobacterium sp. SWAN-1
Genome accession: NC_015574
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.3
Position : 1413605 - 1415551 bp
Length : 1947 bp
Strand : +
Note : TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: msi:Msm_1127 cation transporter HAD ATPase; PFAM: ATPase, P-type, ATPase-associated

DNA sequence : 
ATGTCACAGAATAACAATAAAACCGAAGAAACCACTGTAGATACATGTAAATATTGTGATGCAAACTTATTTGAGGAAAA
AGAAGAGGAAGAGAACAAAATCAAACCAAGTTATATTATAGGAATATCAGCTATAATCTTAGCTGTTGGTTTGTATCTTA
ACTTCTTTGCAGGCAAAAAATTATTTGCAGAAATCCTTTTTCTTGCAGTTGCAGTAATTTCAGGATATGAAATAATACCA
AATGGAATAAAAAAGCTTTTTCAAGGAAAATTTAATATAAGTTTTTTAATTACCATTGCTGCTGCAGGGGCATTCATAAT
AGGTGAAGGAGCTGAAGGTGCAGCAGTAATATTTCTATTCTTTATTGCAGAGTATTTAGAAGACTATGCTGGAGAAAGAG
CCAGAAGGTCAGTTGGAGCGTTAATAAAGCTCACCCCACAAAACGCAGTGGTCAAAAGAGATGGTAAAAATATTGAATTA
CATGCTCATGCAGTTGATATAAATGAAATTGTGGTTGTTAAGCCTGGAGATAAAATTCCATTAGATGGAATTGTAGTTAA
CGGTACTTCATCAGTAAATCAAGCTGCAATAACTGGTGAAAGTATACCTGAAACGAAAAAAGAAGGAGACACAGTTTTTG
CAGGTACCTTAAATGAAGAAGGTTATCTTGAAGTAAGAGTAACAAAAAAATCAAATGAAACAGTATTATCTAAAATTATA
GCGCTTGTTAAAGCATCCCAACAAAAGAAATCAAAAACTGAAGCATTTATAGACAGATTCTCCAATTATTACACTCCTGC
AGTAATAGGACTTGCAATAATAGTAGCGACAGTACCACCATTTATTTTTGGCTTAAATTTTGACACATGGTTTTACAGAG
CTTTAGTATTGCTTGTAGTATCTTGTCCATGTGCATTAGCCATGTCAACTCCGGTTTCCATAGTTTCAGGAATAACAGCA
GGTACAAACAATGGTGTGTTAATTAAAGGCGGGGAATACGTTGAAGCAATGCAAAAAATCAAAACAATGGTTTTTGATAA
AACTGGAACACTTACAGAAGGAAAATTAGAAGTAACAGACATTATATCATTAAATAACTATTCTGAAAAAGAAATTCTTC
AGATAGCGGGTTCACTGGAATCAAAATCCAAACATCCTCTTGCTGAAGCAGTTATACAATGCATTGAAAAATCAGATATG
GACCTAAAAGAAGTAGATAATTTTGAATCTATTACTGGAAAAGGTGTTAAAGGATTAATTAATGAAAAAATGTTTTACAT
CGGTAAAAGAAGCCTTTTTAAAGGTAGCCCTGATTTACCAGATGACCTCATACGGAAGCATGAAAATGAAGGTAAAACTA
TTGTTATTATCGGTAATGATGAACATATTATTGGATTGATAAGTTTAATGGATAAAATACGCCCACTTTCAAGAAGCACA
ATTCAGGAACTTAAAGAAAGCAATATTAAAACCGTAATGCTTACTGGTGATAATGAAGGCACAGCAAAAGCAGTATCATC
TAAAATAGGTATTGACAATTATTATGCTGGTCTTTTACCTGAAGATAAGGTTAGAATAATTAATGAGTTACTTGAAAATG
GGGAACAAGTTGCTATGGTTGGTGATGGTGTAAATGATGCTCCTGCACTTGCAGTATCCAATGTAGGTATTGCAATGGGC
ACTGCTGGTTCAGATGTGGCAATAGAAACCGCAGATATAGCTTTAATGCATGATGACATTTCCAAAGTTAATTATCTGAT
CAATTTAAGCAAAAAAACCATGTCTGTTGTTAAACAAAATGTTTCAGTATCCATTTTAGTTAAAGGGTCCTTCGCATTCT
TCGCAGTGCTTGGATTTGTTTCATTATGGATGGCTGTAGCATTTGGAGATATGGGATTAACCCTTGCAGTAATCTTAAAC
GCTTTAAGAATAGGGAGCGCAGATTAA

Protein sequence : 
MSQNNNKTEETTVDTCKYCDANLFEEKEEEENKIKPSYIIGISAIILAVGLYLNFFAGKKLFAEILFLAVAVISGYEIIP
NGIKKLFQGKFNISFLITIAAAGAFIIGEGAEGAAVIFLFFIAEYLEDYAGERARRSVGALIKLTPQNAVVKRDGKNIEL
HAHAVDINEIVVVKPGDKIPLDGIVVNGTSSVNQAAITGESIPETKKEGDTVFAGTLNEEGYLEVRVTKKSNETVLSKII
ALVKASQQKKSKTEAFIDRFSNYYTPAVIGLAIIVATVPPFIFGLNFDTWFYRALVLLVVSCPCALAMSTPVSIVSGITA
GTNNGVLIKGGEYVEAMQKIKTMVFDKTGTLTEGKLEVTDIISLNNYSEKEILQIAGSLESKSKHPLAEAVIQCIEKSDM
DLKEVDNFESITGKGVKGLINEKMFYIGKRSLFKGSPDLPDDLIRKHENEGKTIVIIGNDEHIIGLISLMDKIRPLSRST
IQELKESNIKTVMLTGDNEGTAKAVSSKIGIDNYYAGLLPEDKVRIINELLENGEQVAMVGDGVNDAPALAVSNVGIAMG
TAGSDVAIETADIALMHDDISKVNYLINLSKKTMSVVKQNVSVSILVKGSFAFFAVLGFVSLWMAVAFGDMGLTLAVILN
ALRIGSAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 4e-120 46
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 2e-123 46
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 2e-123 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSWAN_1314 YP_004520132.1 heavy metal translocating P-type ATPase BAC0629 Protein 3e-80 42
MSWAN_1314 YP_004520132.1 heavy metal translocating P-type ATPase BAC0455 Protein 3e-101 41