Gene Information

Name : MSWAN_1313 (MSWAN_1313)
Accession : YP_004520131.1
Strain : Methanobacterium sp. SWAN-1
Genome accession: NC_015574
Putative virulence/resistance : Resistance
Product : regulatory protein ArsR
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 1413241 - 1413618 bp
Length : 378 bp
Strand : +
Note : KEGG: ttm:Tthe_2442 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR

DNA sequence : 
ATGGTCATATGTACTGTTATACATATGAAAGAAAATGATATTTGTGAAATTGAATGTATCCATGAAGAAGCAGTGAAACA
AGCTAAATCTAATATGATGGATGAAAGTGTCCTCTTAGAAGTATCAGAGACTTTTAAGATATTCGGTGACCTTACAAGAC
TTAAAATTTTACAAGCTTTATATCACAAAGAGTTATGTGTGTGTGATTTAGCTGCAGTGCTTGATGCGAATCAATCAACA
ATATCTCACCAATTACGTTTATTAAGGAATAAAAATTTGGTTAAATTCCGAAAAGAAGGTAAAGTAGCTTATTATTCCCT
TGCAGATGAACACGTAGTAAAAATAATGGAGATTGGAGTCGAACATGTCACAGAATAA

Protein sequence : 
MVICTVIHMKENDICEIECIHEEAVKQAKSNMMDESVLLEVSETFKIFGDLTRLKILQALYHKELCVCDLAAVLDANQST
ISHQLRLLRNKNLVKFRKEGKVAYYSLADEHVVKIMEIGVEHVTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 1e-19 45
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 1e-19 45
cadX YP_252015.1 hypothetical protein Not tested SCCmec Protein 4e-12 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSWAN_1313 YP_004520131.1 regulatory protein ArsR BAC0056 Protein 8e-17 44