|
Name : Desku_0593 (Desku_0593) Accession : YP_004516008.1 Strain : Desulfotomaculum kuznetsovii DSM 6115 Genome accession: NC_015573 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 621934 - 624576 bp Length : 2643 bp Strand : - Note : TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: pth:PTH_1976 DNA polymerase I; SMART: 5'-3' exonuclease, DNA sequence : TTGCAGGAAAGCACGTTCTTAATCCTCGACGGCAACAGCCTGGCCCACCGGGCCTTTCATGCCATACCCCATCTGGCGAC CAGTCAAGGGGTGGCAACCAATGCCGTCTACGGTTTTACCAATATGCTCCTCAAGGTTCTCAAAGAACTCAAACCCGGCC TGGTAGCCGTTTGCTTTGATAAGGGAAAGATCACCTTTCGCCACGATCATTATGAGGATTACAAGGCCCACCGTCCGGCT ACCCCCGATGAGCTGCGCCCCCAGTTCCCCCTGATTAAAGAAGTTTTAGCGGCCATGAACATCCCCGTGCTGGAACGTGA GGGATATGAGGCCGATGATCTAATCGGGACGCTGGTCAACCGGGCGGAGCAAGCGGGAATCTCCAGCATTATCGTTACCG GTGACCAGGATACCCTGCAACTGGTTTCACCCCTGACCAGGGTGTTCCTCACCCGCAAGGGAATCAGTGAACTGGAGGAA TACACTGAGGGCCGGGTATGGGAGCGCTTTGGCATTACCCCGGCCCAGTTTCCCGATTATAAAGGACTGGTGGGAGATCC TTCCGACAACATTCCCGGGGTACCGGGAATTGGTCCTAAAACGGCTAAAGCTTTGCTTAAAGAATATGGCTGCCTGGAAG AACTGGTGTCCCAAGTCGACTCCCTGCCCGTCCGTTTCCGGGATAAAATACTCCCGTATCAAGAACAGGCCTTGTTGTCC AAACGACTGGCCACCATTGAGCGGGAGGTACCCCTGGAAATTGACGTGGACGCTTTTCGCTGGCCGGGGCCGGATTACAA CCGGTTGCTGGCCCTCTTCAGCAGGCTGGAATTTAAAACTTTAATCCGGGCTATCAGGCAGGAACTTGGGCAGCCTGCCC GGGTGGTGGAAACTTACCGGGTAACCTTCCGGGTCCTGGCAGATCAGGAAGAGTTGTCCCGTTTGGTGGAACTGTGCCGG CGCGCGGGCCGGGTGGCTATAGCTTTGAGCGGGAGCCGCCAGGAAGGCATAGTGGCGGCGGCCCTGGGATTAAAAGCCCC CGGGGACAGTCCGGAAGCACCCTATCTATCGATTTTTTACCTGGAACCGGGGGACCCGGCCAGCAACCCGGCGGCCCTGG ACACGCTGGCCGGGATTTTCCGCGACCCCGATACAGAAAAGCTCCTCCATGACGGCAAGAGCGCCCTGTGGCTTTTACAA AAGCACGGCCTCGCCTTAAACAACCTGGCTTTTGATACCATGGTGGCTGCGTACCTGCTCAATCCCGCCTCGGCCAACCA GGAACTCGCGGACCTGGCCCTGGAACATTTAAAAGTTGTCCTGCCCGCCCGGGGTGAGGAAGCCCTGGCGGCCCGGGCCG ACGTCATCTGGCGCCTGTCGGAACTGCTGGCCGAAAAGCTGCGCCTGGCGGAAATGGAAAGGTTGTATTACGAAGTAGAG CTGCCCCTGGTAGCCGTCCTGGCCGACATGGAAATGACCGGGGTGGCCGTGGATAAACAATACCTGGAAGAAATGTCCCG GGAACTGGAGATAAAGCTCGCCGCTATAGCGGAGCAGATTTACCAGCTGGCCGGGGAACAATTCAACATCAACTCCACCC GCCAGCTGGGTTACATCCTTTTTGAAAAGCTGGAATTGCCCGTAATCAAAAAAACCAAAACAAGTTATTCCACCGATGCT TCCGTGCTGGAGGAACTGGCCGGCGCTCATCCCATTGTTCCTCTGGTACTGGAATACCGCCAGCTGATGAAATTAAAATC CACCTACGTTGACGGCCTGGCCGCCCTGATCAATCCCGAAACGGGCCGGCTGCATACCACCTTCCACCAGACGGTAACGG CTACCGGACGGCTATCCAGCTCCGATCCCAACTTGCAGAACATCCCCATCCGCATGGAGGAAGGACGCAAAATCAGAAGG GTTTTCATTCCCCGCCGGGAGGGGAACCTGATCCTTACCGCCGATTACTCCCAGATCGAATTGCGGATTCTGGCCCATAT GGCCGGGGACCCCAACCTGCTGGAAGCCTTCCGCCAGGGCCAGGACATCCACACCCGCACGGCCGCCGAGGTTTTTGGCG TGGCCATCACCGAAGTAACGGCCGATATGCGGGGCCGGGCCAAGGCGGTCAACTTCGGTATTGTCTACGGCATCAGTGAT TTTGGCCTGGCCCGGGACATTAACGTCTCCCGCCAGGAAGCCCGGCAATACATTGAAAATTACTTTGCCCGTTACGCAGG GGTAAAGGCTTTTATAGAGCGCACCATCCAGCAGGCCAGGGAGAAGGGCTACGTAACCACTCTTTTAAACCGGCGCCGCT ACCTGCCGGATCTCTTTAGCGCCAACCGCAACGTGCGCATGTTTGGCGAGCGTACCGCCATCAATACACCCATTCAGGGC AGCGCCGCCGACATCATCAAGCTGGCCATGGTGCGCATCCACCGGGAATTAAAGGACCGGGGACTGGCCACCAGGATGAT CCTGCAGGTGCACGACGAGTTGATTTTCGACATGCCCGCCGGGGAACTGCCGGAGGTTTCCGAACTGGTCCGGCGACACA TGGAAAACGCCCTGGTGCTGGATGTCCCGCTGGTGGTAGACATGAAGCTGGGGCCAAACTGGTACGAGGTGAAGAAAATT TAG Protein sequence : MQESTFLILDGNSLAHRAFHAIPHLATSQGVATNAVYGFTNMLLKVLKELKPGLVAVCFDKGKITFRHDHYEDYKAHRPA TPDELRPQFPLIKEVLAAMNIPVLEREGYEADDLIGTLVNRAEQAGISSIIVTGDQDTLQLVSPLTRVFLTRKGISELEE YTEGRVWERFGITPAQFPDYKGLVGDPSDNIPGVPGIGPKTAKALLKEYGCLEELVSQVDSLPVRFRDKILPYQEQALLS KRLATIEREVPLEIDVDAFRWPGPDYNRLLALFSRLEFKTLIRAIRQELGQPARVVETYRVTFRVLADQEELSRLVELCR RAGRVAIALSGSRQEGIVAAALGLKAPGDSPEAPYLSIFYLEPGDPASNPAALDTLAGIFRDPDTEKLLHDGKSALWLLQ KHGLALNNLAFDTMVAAYLLNPASANQELADLALEHLKVVLPARGEEALAARADVIWRLSELLAEKLRLAEMERLYYEVE LPLVAVLADMEMTGVAVDKQYLEEMSRELEIKLAAIAEQIYQLAGEQFNINSTRQLGYILFEKLELPVIKKTKTSYSTDA SVLEELAGAHPIVPLVLEYRQLMKLKSTYVDGLAALINPETGRLHTTFHQTVTATGRLSSSDPNLQNIPIRMEEGRKIRR VFIPRREGNLILTADYSQIELRILAHMAGDPNLLEAFRQGQDIHTRTAAEVFGVAITEVTADMRGRAKAVNFGIVYGISD FGLARDINVSRQEARQYIENYFARYAGVKAFIERTIQQAREKGYVTTLLNRRRYLPDLFSANRNVRMFGERTAINTPIQG SAADIIKLAMVRIHRELKDRGLATRMILQVHDELIFDMPAGELPEVSELVRRHMENALVLDVPLVVDMKLGPNWYEVKKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 6e-163 | 42 |
