Gene Information

Name : Desku_0371 (Desku_0371)
Accession : YP_004515800.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Unknown
Product : Ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 389590 - 390375 bp
Length : 786 bp
Strand : +
Note : PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: pth:PTH_0791 ribonuclease PH

DNA sequence :
ATGGAAAGGGTAGACGGGAGAAAACCCGGTCAGATGAGGCCGGTGAAGATTACCAGGCATTTTAACAAATATGCCGAGGG
TTCGGTCCTGGTGGAGGTGGGCGATACCCGGGTTATTTGCACGGCCACGGTTGAGGACAGGGTGCCTCCCTTCCGCCAGG
ATACGGGTATGGGCTGGGTGACTGCCGAATACGGCATGCTGCCCCGGGCCACAGGCGTGCGTACCTCCCGCGACCTTACC
CGCGGCAAGGGCCGCACCCAGGAAATCCAGCGGCTCATTGGGCGCTCCCTGCGCTCGGTGGTGGATTTGTCCGCCCTTGG
AGAGCGGACCGTGATCCTGGACTGCGATGTGATCCAGGCCGACGGGGGTACCCGCACCGCTTCCATTACCGGTGCCTTTG
TGGCCCTGGTGGATGCCCTGGCCCACCTGGTGGGAGAGGGGTCGCTCCCCTATCTGCCTGTGAAAGATTTTGTGGCCGCT
ACCAGTGTGGGCCGGGTAAACGGAGAACTGGTTCTTGACCTGTGCTTTGCCGAGGATTCGGCTGCCGAAGTGGACATGAA
TGTGGTGATGACCGGTGAAGGCCGCCTGGTGGAAGTCCAGGGTACCGGGGAGGAAGCTTCCTTTACCCGGGAGGAATTGA
ACCGGATGCTGGACCTGGCAGCGGAAGGCATCAGGCTGCTGGTGGATTATCAGAAGGAAGTCCTGGGCCCCGCCCTGGTC
AGCCAAATTGGACCCAAAGGGGAAATGAGTAATGAAACTGGTACTGGCCACACGCAATCAGGGTAA

Protein sequence :
MERVDGRKPGQMRPVKITRHFNKYAEGSVLVEVGDTRVICTATVEDRVPPFRQDTGMGWVTAEYGMLPRATGVRTSRDLT
RGKGRTQEIQRLIGRSLRSVVDLSALGERTVILDCDVIQADGGTRTASITGAFVALVDALAHLVGEGSLPYLPVKDFVAA
TSVGRVNGELVLDLCFAEDSAAEVDMNVVMTGEGRLVEVQGTGEEASFTREELNRMLDLAAEGIRLLVDYQKEVLGPALV
SQIGPKGEMSNETGTGHTQSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 7e-61 59