Gene Information

Name : Desku_3551 (Desku_3551)
Accession : YP_004518828.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3585014 - 3585433 bp
Length : 420 bp
Strand : -
Note : KEGG: pth:PTH_2891 single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding

DNA sequence :
ATGCTCAATAAGATCATTCTAATCGGGCGCCTGGTTAAGGAACCCGAACTGCGGTACACGCCCAACGGTGTGGCGGTGGC
CAGATTTACCATAGCGGTGGACCGTCCCTTTGCCAACCGGCAGGGGGAGCGGGAGGCTGATTTTATTGACATCGTGGTCT
GGCAGAAGCAGGCGGAAGTTTGTGCGCAGTACCTGGGTAAAGGTCGGTTGGTGGCCGTAGAAGGCCGCCTGCAGATCCGC
TCCTACGATGACAGCCAGGGGATACGGCGCAAGGCGGCCGAAGTAGTGGCCGATCAGGTACGCTTCCTGGACCGGCCCCG
GGAGGGTCAGGCCGCTGCGGGCGCCGGGGGCCATGATTTTGGTTTGGCTGAGAGCGGATACAGTGAGGTTAATTTCAGCG
AGGACGATATACCCTTCTAG

Protein sequence :
MLNKIILIGRLVKEPELRYTPNGVAVARFTIAVDRPFANRQGEREADFIDIVVWQKQAEVCAQYLGKGRLVAVEGRLQIR
SYDDSQGIRRKAAEVVADQVRFLDRPREGQAAAGAGGHDFGLAESGYSEVNFSEDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-28 60
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-26 58
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-28 55
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 8e-28 55
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-28 55
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-28 54
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-28 54
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 6e-28 53
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 3e-29 50
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-29 50
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 7e-27 49
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 3e-16 45
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 5e-16 45
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 3e-23 42