Gene Information

Name : Desku_2963 (Desku_2963)
Accession : YP_004518265.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2966233 - 2966961 bp
Length : 729 bp
Strand : -
Note : KEGG: IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core

DNA sequence :
GTGACCAAGTTGTCGGTGAAGGAGCAGTGTAAGGCTTTAAAACTGGCATATATCCCGTCTATTTACCTGGAGATCACCTG
CCATGACCGGGAACAATACCTGACCGACCTGTTCGCAGCCGAACTGGAAGCGCGTTGGGCTAACAGGGTCCGCCACCTTA
TCAAGAAGGCGGGTTTCCCGGCCCATAAGACGCTGAATGACTTTGACTGGAAGCCCGTGACCTTACCGGCCTCCACCACC
ATCACCCATCTGACAGAACTCACCTTCATCGAGCGCTGTGAAAACGTGCTGGCGCTCGGGGCCGTGGGCACCGGCAAAAC
GCATTTGGCCATCGCCCTGGGGGTTCGGGCCTGCATGGAGGGGAGGAGCGTCCGTTTCTACCGGTGCCTGGACCTCGTCA
ACGCCCTGTTGGAAAGTCACCGCCAGGGTCGTTTGCAGCGGCTGATGGGAGAGCTAGAGAAGGTCGATCTGATTATCATC
GATGAGCTTGGCTTCGTGCCACTTCTCCGTGAGGGAGCTGAACTCTTATTCAACGTTGTAGCTCAAGCGTATGAACGACA
AAGTATCATTGTTACTTCCAACTTACAGTTTGGTCAGTGGAACACCGTGCTGGGGGATAACCGCCTCACAGCAGCGCTCA
TCGACCGTTTGGTCCACCATGCCCATATCCTGGCCTTTGAAGGGGAGAGCTATCGTTTTGCAGAAAGCGCTCTCAGCCAT
AGCTATTAA

Protein sequence :
MTKLSVKEQCKALKLAYIPSIYLEITCHDREQYLTDLFAAELEARWANRVRHLIKKAGFPAHKTLNDFDWKPVTLPASTT
ITHLTELTFIERCENVLALGAVGTGKTHLAIALGVRACMEGRSVRFYRCLDLVNALLESHRQGRLQRLMGELEKVDLIII
DELGFVPLLREGAELLFNVVAQAYERQSIIVTSNLQFGQWNTVLGDNRLTAALIDRLVHHAHILAFEGESYRFAESALSH
SY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 2e-40 45
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 1e-31 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-33 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 4e-33 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 4e-33 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 4e-33 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 4e-33 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 5e-33 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 4e-33 42
unnamed CAA21402.1 - Not tested HPI Protein 5e-33 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 5e-33 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 5e-33 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-33 42
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 7e-36 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 9e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desku_2963 YP_004518265.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 6e-32 42
Desku_2963 YP_004518265.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 2e-33 42
Desku_2963 YP_004518265.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 2e-33 42
Desku_2963 YP_004518265.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 2e-33 42
Desku_2963 YP_004518265.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 5e-33 41