Gene Information

Name : Desku_2811 (Desku_2811)
Accession : YP_004518124.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2802558 - 2803241 bp
Length : 684 bp
Strand : +
Note : KEGG: toc:Toce_0285 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver re

DNA sequence :
GTGTCCGGTTTCAGGATCCTGGTGGTGGAAGACGAGGAACCTATCCGGGGCTTTATCAGGATAAACCTGGAGCGCAACGG
CTTTGAGGTACGGGAGGCAGCCAGTGGAGAAGAGGCTCTCAATCTGATGCTGGAAACGTTGCCCCACCTGGTGGTGCTGG
ACCTGAAATTGCCGGGGATGGACGGTTTGGAGGTATGCCGTATCCTGCGCCAGAAATACCCCCAGGTGGCCGTACTGATG
CTCACTGCCCGCGGCCAGGATATGGACCGGGTAAAAGGCCTGGAAATGGGTGCCGACGACTACGTGGTCAAGCCCTTCAA
TCCCCTGGAACTGGTGGCCAGCGTAAAGGCAATCCTGCGCCGTGTTTTCCCGGCTGCCGACGGTGTGATTTGTTATGGGG
ACCTGAGCATCTTTCCGGCTGCACGGCAGGTAAAAAAAGGGGGTAAACTCTTAGAGCTCACCCACCGCGAATTTGACCTG
CTCCTCTTTTTAGCCCGGAATCCCGGGCGGGTTTTCAACCGGGACGAATTGCTGGACCACGTCTGGGGCGAGAATTATTT
CGGCGACCCCAAAACGGTGGACGTGTACATCCGCCGGCTGCGGGCCAAGCTGGAAAACGGACGGGCCAACCCGGGTTTCA
TTGAAACAGTCTGGGGCGTGGGATACCGCTGGCGGGCAGAATAG

Protein sequence :
MSGFRILVVEDEEPIRGFIRINLERNGFEVREAASGEEALNLMLETLPHLVVLDLKLPGMDGLEVCRILRQKYPQVAVLM
LTARGQDMDRVKGLEMGADDYVVKPFNPLELVASVKAILRRVFPAADGVICYGDLSIFPAARQVKKGGKLLELTHREFDL
LLFLARNPGRVFNRDELLDHVWGENYFGDPKTVDVYIRRLRAKLENGRANPGFIETVWGVGYRWRAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-41 47
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 8e-42 46
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-30 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 1e-45 49
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 2e-44 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 2e-44 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 2e-44 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 2e-44 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 2e-44 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-44 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 2e-44 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 2e-44 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 2e-44 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 2e-44 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 2e-48 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 3e-39 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 1e-32 43
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator CP000647.1.gene2531. Protein 1e-37 43
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator BAC0197 Protein 3e-31 42
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 4e-42 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 8e-36 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 8e-36 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 8e-36 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 8e-36 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 8e-36 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 8e-36 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 8e-36 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 8e-36 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 3e-33 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator EU250284.1.orf4.gene Protein 6e-36 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator BAC0125 Protein 2e-32 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_009085.4919120.p0 Protein 1e-23 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_011586.7046392.p0 Protein 9e-27 41
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator NC_010410.6002907.p0 Protein 9e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator VFG1702 Protein 4e-42 47
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator VFG1563 Protein 5e-42 46
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator VFG1389 Protein 6e-32 44
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator VFG0596 Protein 8e-31 43
Desku_2811 YP_004518124.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-37 42