Gene Information

Name : Desku_2766 (Desku_2766)
Accession : YP_004518081.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2745557 - 2746240 bp
Length : 684 bp
Strand : -
Note : KEGG: dsy:DSY4081 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region

DNA sequence :
TTGGCCCGGATTCTGCTGGTAGATGACGAGATCAGCATCAAGCGGGTGGTGGAGCAGACCCTGGAACGGGAAGGTTTTAC
GGTGGACTATGCCGCCGACGGGCTGGCGGCCCGGGAGCTCTTTACCCGCCGGCAGCCGGATCTGGTCATTCTGGACGTCA
TGCTGCCGGAGATTGACGGATTTGAGCTCTGCCGGCGCTGGCGGGAGGTGAGCGACGTGCCCATTCTCATCCTTTCCGCC
AAAGGGGACATTGTGGATAAAAGTGTGGGGTTTAATTGCGGTGCCGATGACTATTTAACCAAACCTTTCAGCCCGGTGGA
GCTGGCTTTGCGGGTCAAGGCGCTGTTGCGCCGCAGCCGGCAGGGCCGGATGGACCGTTCGGACCGGGTGGAAGCGGCAG
GCCTGCAAATAGATGCCTTTCAGCGCCGGGTGTGGGTGGAGGGAAGGGAGGTGGAGCTCACGCCAAAGGAATTTGACCTC
CTGTGGTTTCTGGCCCGCCACCCCGGACGGGTATTTACCCGGGAGCAAATCTTTGCACACGTTTGGGGCGATGACGTGTT
AAGTGATTTGAGTACGGTTACCGTATTTATGCGCCGGCTGCGGGAAAAAATCGAGGCCGATCCCCGCAAGCCCCGGTATT
TGAAAACCATCTGGGGCGTGGGTTATAAATTTGTCGCCGAATAA

Protein sequence :
MARILLVDDEISIKRVVEQTLEREGFTVDYAADGLAARELFTRRQPDLVILDVMLPEIDGFELCRRWREVSDVPILILSA
KGDIVDKSVGFNCGADDYLTKPFSPVELALRVKALLRRSRQGRMDRSDRVEAAGLQIDAFQRRVWVEGREVELTPKEFDL
LWFLARHPGRVFTREQIFAHVWGDDVLSDLSTVTVFMRRLREKIEADPRKPRYLKTIWGVGYKFVAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 9e-38 42
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-28 41
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-28 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 1e-42 48
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator AF155139.2.orf0.gene Protein 4e-44 46
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 1e-42 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 6e-37 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 5e-37 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 5e-37 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 5e-37 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 5e-37 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 5e-37 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 7e-37 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 5e-37 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 5e-37 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 5e-37 45
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 3e-34 44
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 2e-40 43
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator AM180355.1.gene1830. Protein 1e-39 42
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 4e-38 42
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 8e-38 42
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator AF162694.1.orf4.gene Protein 8e-37 42
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 1e-36 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 1e-36 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 1e-36 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 1e-36 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 3e-32 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 1e-36 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 1e-36 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 1e-36 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 1e-36 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator AF310956.2.orf0.gene Protein 7e-29 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator AE016830.1.gene2255. Protein 1e-28 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator U35369.1.gene1.p01 Protein 1e-28 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_014475.1.orf0.gen Protein 9e-38 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator NC_005054.2598277.p0 Protein 9e-38 41
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator EU250284.1.orf4.gene Protein 4e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator VFG1563 Protein 5e-38 42
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator VFG1389 Protein 5e-31 42
Desku_2766 YP_004518081.1 winged helix family two component transcriptional regulator VFG1702 Protein 5e-37 41