Gene Information

Name : Desku_2003 (Desku_2003)
Accession : YP_004517360.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Resistance
Product : ABC transporter permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 1988500 - 1989390 bp
Length : 891 bp
Strand : -
Note : PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dau:Daud_0387 binding-protein-dependent transport systems inner membrane component

DNA sequence : 
ATGCACGAGACGGTTACTGTCTTCCGCACGGCTTTCCCCCTGGCGAGACTGCTTCAGGGTATCGGCCGGGATCGGGCGTC
TTTCGCGGGCGGGGTAGTGGTTATTCTGCTGGTGCTGGTAGCGTTGTTGGCGCCGTGGTTGGCGCCCCACGACCCGGTGA
AGCAGAACCTGGCCCACGCGCTGGCCCCGCCCGGCGGCGAATATCCCCTGGGAACGGACGACATGGGGCGCTGTTTGCTG
AGCCGGGTACTGTACGGCACCCGCATCTCCCTCGCCGTGGGCCTCCTGGTTGGGGGGCTGTCGGCGGTCGCGGGGACGCT
CATCGGTCTGATTGCGGGTTATTACGGCGGCTTTTTGGACGAGGTCCTGATGCGCCTTACCGATGTGTTGATGGGTCTTC
CCAACCTTGTCTTTATTCTGGCGGTGGTGGGTGTTTTAGGACCGGGGCTGGGAAACACTATCCTGGCGCTGGTGGCCTTG
GGGTGGCTGCACTTCGCCCGCGTGGTACGCGGCAGCGTCTTATCGCTCAAAGAGAGCGAGTTCGTCCTGGCGGCCCGCGC
CCTGGGTTTCAGCGGCCCGCGGATCATGGTCCGGCATATCCTGCCGAACGTGCTCGGTCCGGTTGTGGTTTTGGCGACGT
TTGACATTCCGCACACCATCCTGGCGGTGGCCGGGCTGAGTTTTCTGGGGCTTGGCGTGCAGCCGCCAACGCCGGAATGG
GGGGCGATGCTTAACGCGGCGCGACCATACATGCGAACCTATCCGTTGCTGATGATCACCCCCGGGCTGATGATCTTCTT
GACGGTGCTGGCCTTTAACCTGGTGGGAAACGGCCTGCGCGACGCCCTTGACCCGCGGCGGAGCCGGATTCTTGACGGAG
TGGGAGGTTAA

Protein sequence : 
MHETVTVFRTAFPLARLLQGIGRDRASFAGGVVVILLVLVALLAPWLAPHDPVKQNLAHALAPPGGEYPLGTDDMGRCLL
SRVLYGTRISLAVGLLVGGLSAVAGTLIGLIAGYYGGFLDEVLMRLTDVLMGLPNLVFILAVVGVLGPGLGNTILALVAL
GWLHFARVVRGSVLSLKESEFVLAARALGFSGPRIMVRHILPNVLGPVVVLATFDIPHTILAVAGLSFLGLGVQPPTPEW
GAMLNAARPYMRTYPLLMITPGLMIFLTVLAFNLVGNGLRDALDPRRSRILDGVGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desku_2003 YP_004517360.1 ABC transporter permease BAC0272 Protein 7e-37 46