Gene Information

Name : Desku_1903 (Desku_1903)
Accession : YP_004517266.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase xerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1901005 - 1901901 bp
Length : 897 bp
Strand : -
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: drm:Dred_1099 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence :
TTGCAGGATTTAATTGGCACCTTTATCCATTACCTGGCGGTGGAAAAGGGTCTGGCCCGGAACACCACGACTTCCTACCA
GCTCGATTTAAACCAGTACTGGCTTTTTTGCCGGTCCCGGCGGTTGGATCCCCTGGGGGAGGGACGCGGTGCCGTGATGG
CTTATTTGCTCAAGTTAAAAAAAGAGGGGCGGGCTCCGGCCACCGTTTCCCGGCACCTGGCGGCTTTAAAATCTTTCTAC
CGCTTCCTGGTTCAAGAAGGAGTAATTTCGACCGATCCGACCGCTAATTTGGAATCCCCCCGCCTGGCTCAGCGGTTGCC
GAGGGTATTGACCCCCGAAGAAGTAGACAGGCTCCTGGCTCAACCCTGCACATCCTCGGCCACCGGACTGCGGGATAAGG
CCATGCTGGAACTGCTTTACGCCACCGGCCTGCGGGTGAGTGAGCTGGTTTCCCTGGATCTGGCCGATGTTAATTTGGAG
CACGGTTTTGTGCGTTGTTTCGGGAAAGGATCCAAAGAGCGAATTATCCCCCTGGGTTCCGTGGCCGCTTTTTATGTATC
CGAATACCTCACCCGGGCCAGGGTAAAACTAACCAGAGGCATCAATACCCCTGCTCTGTTTGTCAATCAGCAGGGCCGCC
GCCTCACCCGGCAGGGATTCTGGAAGATTATAAAAAAGTATGCCCGCCAGGGGCGCATTACTAAGGTCATCACCCCTCAT
ACCCTGCGCCATTCCTTTGCCACCCACCTGCTGGAAAACGGTGCCGACCTGCGTTCTGTTCAGGAATTGCTCGGTCACGC
CGATATTGCCACCACGCAAATTTACACCCATGTAACCCGTACCAGGCTGCGGGAAATTTATGACCGCACCCATCCCCGGG
CGCAACTGGATGGATAA

Protein sequence :
MQDLIGTFIHYLAVEKGLARNTTTSYQLDLNQYWLFCRSRRLDPLGEGRGAVMAYLLKLKKEGRAPATVSRHLAALKSFY
RFLVQEGVISTDPTANLESPRLAQRLPRVLTPEEVDRLLAQPCTSSATGLRDKAMLELLYATGLRVSELVSLDLADVNLE
HGFVRCFGKGSKERIIPLGSVAAFYVSEYLTRARVKLTRGINTPALFVNQQGRRLTRQGFWKIIKKYARQGRITKVITPH
TLRHSFATHLLENGADLRSVQELLGHADIATTQIYTHVTRTRLREIYDRTHPRAQLDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-55 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-55 43