Gene Information

Name : Desku_1782 (Desku_1782)
Accession : YP_004517151.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 1784549 - 1785865 bp
Length : 1317 bp
Strand : -
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: flagellar protein export ATPase FliI; ATPase, type III secretion system, H+-transporting; ATPase, type III secretion system, FliI/YscN; KEGG: pth:PTH_2085 flagellar biosynthesis/type III secretory pathway ATPase; P

DNA sequence :
ATGGCTTTACCCCAAATCGACCTGGAACGCTGGCGCCGGCGGGTGCGGGCGGCCAAACTGCTGCGCCCCACCGGGCAGGT
GGTACGGGTCATCGGCCTGACCGTGGAGGTGCGGGGCATTGCCGCCCGCATCGGTGAAATCTGCGACATCCACGTGCCCG
GCGAAGCACCGGTGGTGACCGAAGTGGTGGGTTTCCGGGAAGATGTCACCCTGCTCATGCCCCTGGGGGAACTGCGGGGT
ATTTTCCCCGGCTGCAGCGTGGTGCCCCGGGGCCGGGGCCTGTCGGTGGCGGTGGGAGAACACCTCCTGGGACGGGTGCT
GGACGGGCTGGGCCGGCCCATGGACGGCCGGGAGCTCATTGCTCCGGACCAGTGTTACGTACCGGTGGACAACTCCCCGC
CCAACCCCCTGTCCAGACAGCGCATCACACAGATATTTTCCACCGGGGTACGGGCCATCGATGCCTTTCTCACCTGCGGC
CGGGGACAGCGCCTGGGCATATTTGCCGGCAGCGGGGTGGGCAAGAGCACGCTTCTGGGCATGGTGGCCCGGTACAGCAG
TGCCGATGTGAATGTGATCGCCCTGGTGGGGGAACGGGGCAGGGAAGTGCGGGACTTCATTGAAGGGGACCTGGGTCCTG
AAGGACTGGCCCGTTCAGTGGTGGTGGCCGCCACTTCGGACCAGCCGGCGCTGGTGCGGGTAAAGGCCGCCTTTCTGGCC
AGCGCCATTGCCGAATATTTCCGCGACCGGGGTAAAGACGTACTGCTTCTCATGGACTCGATCACCCGTTTTGCCATGGC
CCAGCGGGAGGTGGGTCTGGCCATCGGCGAACCCCCGGCCACCCGGGGTTACACCCCTTCGGTTTTTGCCCTGTTGCCCC
GGTTGCTGGAACGATCCGGGATGGGGGCTACGGGTTCCATCACCGCCTTTTATACCGTGCTGGTGGAAGGGGACGATCTG
AATGAGCCAATTACCGATGCGGTGCGGGGCATTCTGGACGGGCATATCGTCCTGTCCCGGGAAATGGCGGCCCAAAACCA
CTACCCGGCCATTGATGTATTACAGAGCGTGAGCCGGGTAATGCCGGAGATTGTGGACGCAGAACACCTGACCCGGGCCG
GCAGGCTACGGGATCTGCTGGCCACCTACCGCCAGTCGGAGGATTTAATCAACATCGGCGCTTACGTAGCCGGGACCAAC
CCCCAGGTTGACGCCGCAGTAAAGGCCTATCCCCGTATTGTGCAGTTTTTACGCCAGGACATGCACGAGTACAGCAGCTT
TGAGGAAACAATGGAAACCTTACCGGATCCCGGATAG

Protein sequence :
MALPQIDLERWRRRVRAAKLLRPTGQVVRVIGLTVEVRGIAARIGEICDIHVPGEAPVVTEVVGFREDVTLLMPLGELRG
IFPGCSVVPRGRGLSVAVGEHLLGRVLDGLGRPMDGRELIAPDQCYVPVDNSPPNPLSRQRITQIFSTGVRAIDAFLTCG
RGQRLGIFAGSGVGKSTLLGMVARYSSADVNVIALVGERGREVRDFIEGDLGPEGLARSVVVAATSDQPALVRVKAAFLA
SAIAEYFRDRGKDVLLLMDSITRFAMAQREVGLAIGEPPATRGYTPSVFALLPRLLERSGMGATGSITAFYTVLVEGDDL
NEPITDAVRGILDGHIVLSREMAAQNHYPAIDVLQSVSRVMPEIVDAEHLTRAGRLRDLLATYRQSEDLINIGAYVAGTN
PQVDAAVKAYPRIVQFLRQDMHEYSSFEETMETLPDPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-103 56
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-105 56
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-105 56
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-103 56
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-103 56
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-105 56
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-104 55
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-106 55
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-101 54
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-101 54
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 8e-91 54
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 5e-90 54
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-90 54
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-90 54
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-91 54
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-93 54
ECs4568 NP_312595.1 EscN Virulence LEE Protein 9e-92 51
escN AAK26715.1 EscN Virulence LEE Protein 2e-91 51
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 7e-92 51
escN AAL57542.1 EscN Virulence LEE Protein 2e-91 51
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-91 51
escN AAC31513.1 L0034 Virulence LEE Protein 6e-92 51
escN YP_003236088.1 translocator EscN Virulence LEE Protein 9e-91 51
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 6e-92 51
escN CAC81862.1 EscN protein Virulence LEE II Protein 6e-92 51
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-91 51
escN AAC38383.1 EscN Virulence LEE Protein 2e-92 51
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-89 51
escN NP_290268.1 hypothetical protein Virulence LEE Protein 9e-92 51
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-87 50
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-87 50
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-86 48
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 3e-80 48
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 8e-85 47
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-85 47
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-82 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 5e-79 46
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-80 46
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-87 46
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-80 46
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-80 46
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-76 45
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-76 45
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 9e-75 44
invC AAS66861.1 InvC Not tested SSR-2 Protein 3e-73 43
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 5e-70 42
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 5e-70 42
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 5e-70 42
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 5e-70 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 5e-71 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG0192 Protein 1e-107 56
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG0390 Protein 5e-107 55
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG0048 Protein 3e-105 55
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG2144 Protein 5e-107 55
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG1254 Protein 1e-105 54
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG0515 Protein 5e-91 54
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG2331 Protein 5e-99 51
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG0730 Protein 1e-92 51
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG0812 Protein 4e-92 51
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG2499 Protein 2e-101 49
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG1008 Protein 6e-74 44
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG2459 Protein 9e-76 43
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG1778 Protein 1e-71 43
Desku_1782 YP_004517151.1 flagellar protein export ATPase FliI VFG0555 Protein 2e-70 42