Gene Information

Name : Desku_1772 (Desku_1772)
Accession : YP_004517141.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1776931 - 1777728 bp
Length : 798 bp
Strand : -
Note : KEGG: pth:PTH_2076 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein

DNA sequence : 
ATGAAAACACTGACGGAAAGAGATAATCGCAAAATCCTGAAACGCTTCGCCTGGCTGTACAGCCTGCTGGTCCCGCTGTC
TCTGCTGACCCTTTTATTGTCTCCTGCAGCAGCCCAGGCGCAGCCCCTGCCGGGCATCGACCTGCGGGTCACCCCCACGG
ACAACCCGGCCCAGGTGGTGGACAGCGTCAAGCTGCTGGTCCTGCTCACGGTGCTGGCCCTGGCCCCGGGCCTCCTGGTC
ATGGTCACCAGCTTTACGCGCATTGTGGTGGTCCTGTCCATCCTGCGGGGAGCCCTGGGCATACAGCAAACGCCGCCCAA
CCAGGTGATCATCGGCCTGGCCCTGTTTCTGACATTTTTTGTGATGACCCCTACCTTTCAGGAAATTAACCGGGAGGCCC
TGCAGCCCTATTTAAACAACCAGTTGACCCAGGAGCAGGCCTTTGAGGCCGCGGCCAAACCGCTGAAGGCATTTATGCTC
AAACAGACCCGGGAGAAGGACCTGGCCCTGTTCGTCAGCCTGGCCAAAATGCCCCGGCCCCGGAATGCGGATGACCTGCC
CATTACGGTGGTCATCCCGGCTTTCGTGATCAGCGAATTAAAAACCGCCTTCCAAATGGGTTTTCTCTTGTACGTGCCCT
TTCTGGTCATCGATATGGTGGTGGCCAGCGCCCTGATGTCCATGGGCATGTTCATGCTGCCCCCGGTAATGATCTCGCTG
CCTTTCAAGCTGCTGCTTTTTGTGATGGTGGACGGCTGGTACCTGGTGGTCCGGTCCCTGGTGGAAAGCTTCCATTAG

Protein sequence : 
MKTLTERDNRKILKRFAWLYSLLVPLSLLTLLLSPAAAQAQPLPGIDLRVTPTDNPAQVVDSVKLLVLLTVLALAPGLLV
MVTSFTRIVVVLSILRGALGIQQTPPNQVIIGLALFLTFFVMTPTFQEINREALQPYLNNQLTQEQAFEAAAKPLKAFML
KQTREKDLALFVSLAKMPRPRNADDLPITVVIPAFVISELKTAFQMGFLLYVPFLVIDMVVASALMSMGMFMLPPVMISL
PFKLLLFVMVDGWYLVVRSLVESFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 9e-33 45
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 1e-32 45
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 1e-32 45
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-32 45
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 7e-32 44
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 6e-33 44
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 6e-33 44
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 5e-32 44
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 1e-30 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 1e-30 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 1e-30 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 7e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desku_1772 YP_004517141.1 flagellar biosynthetic protein FliP VFG0394 Protein 1e-31 43
Desku_1772 YP_004517141.1 flagellar biosynthetic protein FliP VFG0519 Protein 6e-31 41
Desku_1772 YP_004517141.1 flagellar biosynthetic protein FliP VFG0044 Protein 1e-32 41