Gene Information

Name : Desku_1771 (Desku_1771)
Accession : YP_004517140.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 1776526 - 1776795 bp
Length : 270 bp
Strand : -
Note : KEGG: drm:Dred_2395 flagellar biosynthetic protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; Type III secretion protein HrpO; PFAM: Bacterial export protein FliQ, family 3

DNA sequence :
GTGACCGACACCCTTGTCACCCAGATTGCCCGGGAAGCGCTGATGATGATCCTGATCCTGTCCCTGCCCACCCTGGCGGT
TTCGCTGCTGGTGGGGCTGGTAATCAGCATCCTCCAGGCCACCACCCAGGTGCAGGAGCAGTCCCTGACCTTCGTGCCCA
AGATCATTGCCGTCTTCCTGACGCTGGCCGTCACCGCCCCGTGGATGGTCCGGCTGATGACCAGTTACACCACGCGGCTT
TTCAAGCACCTGCCCAATCTTACGGGGTAA

Protein sequence :
MTDTLVTQIAREALMMILILSLPTLAVSLLVGLVISILQATTQVQEQSLTFVPKIIAVFLTLAVTAPWMVRLMTSYTTRL
FKHLPNLTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS AAK26701.1 EscS Virulence LEE Protein 1e-08 42
escS AAL57528.1 EscS Virulence LEE Protein 1e-08 42
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 2e-08 42
escS CAC81848.1 EscS protein Virulence LEE II Protein 1e-08 42
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 2e-08 42
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-07 42
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-07 42
escS CAI43888.1 EscS protein Virulence LEE Protein 2e-08 41
unnamed AAL06355.1 EscS Virulence LEE Protein 1e-08 41
hrcS ABQ88360.1 HrcS Virulence Hrp PAI Protein 0.007 41
hrpO AAB05076.1 HrpO Virulence Hrp PAI Protein 0.007 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desku_1771 YP_004517140.1 flagellar biosynthetic protein FliQ VFG0043 Protein 2e-05 45
Desku_1771 YP_004517140.1 flagellar biosynthetic protein FliQ VFG0395 Protein 2e-06 41