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Name : Desku_1660 (Desku_1660) Accession : YP_004517039.1 Strain : Desulfotomaculum kuznetsovii DSM 6115 Genome accession: NC_015573 Putative virulence/resistance : Unknown Product : Fis family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 1656674 - 1658410 bp Length : 1737 bp Strand : - Note : TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; PAS fold-4; Helix-turn-helix, Fis-type; KEGG: dae:Dtox_0808 PAS modulated sigma54 specific transcriptional regulator, Fis family; SMART: ATPase, AAA+ type, core; PAS DNA sequence : TTGGCGATCAACAAACTGGAAAACACCGCCTTTTTAAGGGACGAACTGTCTATTTTTAATTCCGTACACAATATGGTCGT TGCTGTAGACTATCAGGGCCGCGTGATCATTTTTAACCCCACCAGCGAACGGATTTTTAATTACCCGGCAGAAAAGGCCC TGGGTCGCCCCATCAGGGAGGTCGTTCCTTTTACGGGTCTCCCCAAGGTGTTGCAGACGGGAAAACCCCACATCGGACGC AAATTTGTCGTTGGCAATGCCCTGTATGTGGTCAACCGCACACCCATAATCCGCAATAACACCATTATAGGCGCCATTGG CGTGGCTCAAGAAATCACCGAACTGCAACATCTGGCCCAGGAACTGAAAGAAATCAAGGAAGTTAACGTCCTCCTGGAAA ATATCTTTCACAGCACACATGAAGGCTACATTGCCACCGGTAATGACGGCCGGATTCTGATGATAAACGGGCCTATGGCG GAACTGCTGGGCGTTACCATCGAAACGGCTGTGGGCCGGCACATCCGTGAGGTTGCTCCCGATAAGCGATTGCACCAAAT CCTCTGGAGCGGTAAATTGCAGTATGGGGAAGTAGTACGCATCCGGGGCAGGGAAACGGTGGTCATGCGGGTGCCCCTTT ATAACCAGGGCAAGTTGGTGGGAGCAGTGAGTAAAGTAATGTTCCAGGACGTGGAACAGCTGCTGGCCCTGGCGGAAAAG ATCAGCATCCAAAGGCGAAGTTCCTTCTGCCCTTCAGTAACACACAATGATAACCACACCGCGCGTTACACCGTGGATAA CCTGATTGGCGCCAGCAGGGATATGCTAAGGCTCAAGGAAACCATCCGGCGGGTGGCCCAGGGACCCTCCACAGTGCTGA TCCGGGGAGAAAGTGGCACAGGCAAAGAACTGGTGGCCCATGCCCTGCACACGGCCTCCCCCCGCCACCGGGGACCCTTC ATCAAGGTTAATTGCGCTGCCGTGCCGGAAAACCTTTTAGAATCGGAGCTTTTCGGCTACCAGGAAGGCGCCTTTACCGG GGCGAGAAAAGGCGGGCAAATCGGCAAATTCGAACAGGCCGATGGGGGAACTATTTTTCTCGATGAAATTGGGGATATGC CCCTGCCCATGCAGGCCAAGATATTGCGAGTCCTGCAGGAAAAGGAAATTGAGCGCCTGGGAGACACCCGTCCCCGCGCC GTGGATGTACGGGTGGTGGCAGCTACCAACCGGGACCTGGAGGAATTAATCCGGCAGGGACATTTCCGGGAAGATCTTTA TTACCGATTAAATGTAGTTTCCCTTTATATTCCACCCCTGCGGGAAAGACCCGATGACATCCCCCTGCTGGTCAACCATT TTATCAAGAAATTCAACCGGGAATTTGGTCTTCTTGTGCGGGGCGTTTCACCGGAAGTCTCGGAGATACTTTACACCTAC GATTGGCCTGGCAACGTACGGGAACTGGAAAACGTAATGGAAAGAGCTTTTAACCTGGTGGAAGGAGATATCATTGAAGT TAAACATATGCCCCCCTACCTTCAGAAAGCGAGCCAGGGCAGGAAAAGAAACCTGCACAATCGCACGCTGGCCACATTAC TGCAGGAGGTGGAAAAGGAAGCCCTTCTGGAAGCCCTGGCTGCTGCCGGTGGCAATAAAATGCAGGCGGCTAAAACCCTG GGTATTTCCAGAGCCTGGTTGTATAAGAAAATGAAACAGTACGGCATCAGGGGATAA Protein sequence : MAINKLENTAFLRDELSIFNSVHNMVVAVDYQGRVIIFNPTSERIFNYPAEKALGRPIREVVPFTGLPKVLQTGKPHIGR KFVVGNALYVVNRTPIIRNNTIIGAIGVAQEITELQHLAQELKEIKEVNVLLENIFHSTHEGYIATGNDGRILMINGPMA ELLGVTIETAVGRHIREVAPDKRLHQILWSGKLQYGEVVRIRGRETVVMRVPLYNQGKLVGAVSKVMFQDVEQLLALAEK ISIQRRSSFCPSVTHNDNHTARYTVDNLIGASRDMLRLKETIRRVAQGPSTVLIRGESGTGKELVAHALHTASPRHRGPF IKVNCAAVPENLLESELFGYQEGAFTGARKGGQIGKFEQADGGTIFLDEIGDMPLPMQAKILRVLQEKEIERLGDTRPRA VDVRVVAATNRDLEELIRQGHFREDLYYRLNVVSLYIPPLRERPDDIPLLVNHFIKKFNREFGLLVRGVSPEVSEILYTY DWPGNVRELENVMERAFNLVEGDIIEVKHMPPYLQKASQGRKRNLHNRTLATLLQEVEKEALLEALAAAGGNKMQAAKTL GISRAWLYKKMKQYGIRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 2e-64 | 41 |
