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Name : Desku_0012 (Desku_0012) Accession : YP_004515463.1 Strain : Desulfotomaculum kuznetsovii DSM 6115 Genome accession: NC_015573 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 19922 - 21196 bp Length : 1275 bp Strand : + Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: pth:PTH_0013 seryl-tRNA synthetase DNA sequence : ATGCTTGATTTAAAATTTGTACGGAGCAACCCGGAACTGGTCAAAGAGGCGCTGGAAAAGCGCGGCGCCGGTTTGAGCCT GGAGCCTTTTCTGGAACTGGAGCGAAAGCGCCGGGAAAAGCTGGTGGTAGTGGAGCAGCTGAAAAACAAGCGCAATGTGG TTTCCGAGGAAATCGGACGGCGCAAAAAGGCCGGGGAAGATGCGGAGGAAATGGTGCAGGAAATGCGCCAGGTATCCGCG CGCATTAAAGAGCTGGACGAGGAAATCCGGGACCTGGAGGAACAGATTCAGGTTACGTTACTGAATATCCCCAATATCCC CCACGAGAGCGTACCGGTGGGCAAGGATGCGGCGGACAACGTGGAAGTGCGCCGTTGGGGTGAACCCCGCCCGTTTGACT TTCCCCCCAGGGCCCACTGGGAACTGGGGGAGAACCTGGACATCATTGATTTTGAACGGGGAGCGAAAGTGGCCGGCGCC CGCTTTTCCTTTTACAAAGGGGCCGGCGCCCGGCTCGAGCGGGCGGTCATCAACTTCATGCTGGACCTGCATACCAGGGA GCACGGTTACATGGAGGTCTTCCCGCCCTTCATCGTAAACGGCGACAGCATGATTGGCACGGGCCAGCTGCCCAAATTTG CCGAGGACATGTTCAAGCTGGAGGGAAAAAACTTTTACCTGATCCCCACCGCCGAAGTGCCGGTAACCAATATTTACCGG GAGGAGATTCTTCCCGGGGAGCGCCTGCCCATTTATCACTGCGCCTACAGCGCCTGTTTCCGGGCCGAGGCCGGGGCGGC GGGCCGGGACACCCGGGGTTTGATCCGGCAGCACCAGTTCAACAAGGTGGAGCTGGTGAAATTTACCCGCCCGGAAGATT CCTACGCGGAGCTGGAAAAACTAACCGCCGACGCCGAGCGGGTGCTGCAGCTTTTGGGCCTGCCCTACCGGGTGGTCTGC CTGTGCACCGGCGACCTGGGCTTTGCGGCGGCCAAGACCTACGACCTGGAGGTGTGGCTGCCCAGCTACCAGGATTACAA GGAGATTTCCTCCTGCAGCAACTTTGAAGACTTCCAGGCCCGGCGGGCCAATATCCGTTTCAAGGATGGGCGGGGCAAGC CCCGGTTCGTGCACACTTTAAACGGCTCGGGCCTGGCGGTGGGCCGGACGGTGGCCGCCATCCTGGAAAACTACCAGCAG TCCGACGGCAGTGTGGTCATTCCGGAAGTGCTGGTGCCCTACATGGGCGGAGTCACCAGGATTACGCCCCCATAA Protein sequence : MLDLKFVRSNPELVKEALEKRGAGLSLEPFLELERKRREKLVVVEQLKNKRNVVSEEIGRRKKAGEDAEEMVQEMRQVSA RIKELDEEIRDLEEQIQVTLLNIPNIPHESVPVGKDAADNVEVRRWGEPRPFDFPPRAHWELGENLDIIDFERGAKVAGA RFSFYKGAGARLERAVINFMLDLHTREHGYMEVFPPFIVNGDSMIGTGQLPKFAEDMFKLEGKNFYLIPTAEVPVTNIYR EEILPGERLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPEDSYAELEKLTADAERVLQLLGLPYRVVC LCTGDLGFAAAKTYDLEVWLPSYQDYKEISSCSNFEDFQARRANIRFKDGRGKPRFVHTLNGSGLAVGRTVAAILENYQQ SDGSVVIPEVLVPYMGGVTRITPP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-126 | 62 |
