Gene Information

Name : Desku_1250 (Desku_1250)
Accession : YP_004516634.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1264733 - 1266805 bp
Length : 2073 bp
Strand : +
Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: pth:PTH_1757 ATP-dependent DNA helicase RecG; SMART: DEAD-like helic

DNA sequence :
ATGGTTGAAGTTGATTTTGAGCAGTATCCCGTACAATATTTGAAAATGGTGGGACCACGCCGTTTTGCCCTGCTGAAGAG
ATTGGGGATCAGGACGGTAAAAGATTTGCTTTACCACTTTCCCCGGGAATACCAGGAACGCACGGTAAAGCCGTCTTATG
CCTGTGCCCATGGGGAACAGGTTACCCTGCAGGGAAGGGTTGTGGGAGTCACCGAGTTAAGCCCCAGATCCGGATTATGG
ATCACAAGGGTAAAAGTGCAGGAACCGACGGGGCACTTTTTTGCCGTCTGGTTTAACCAGCGCTACATAAAAAAACTGTT
TACTGCCGGCAGCCGCGTACAGGTTACGGGAAAAATTGAACGTCGCTTTGGAGAAATTCAGCTGCTGGTTGCCGATTATG
AATTGTTGGAGGGCGAGGAGCCCGTACCACAGGAGGGTATAGTGCCTATTTATCCCCTTACGGAACAATTGACCCAGCGT
CTCATGCGGTCCTTGATGCGCCTTGCCCTGGACGAGTGGACGCCCCGCATCAACGATTTCCTCCCCCCGGGGGTGCGGCA
GAAATTTTTCCTGCCCGAGCTTCCCAGCGCCCTGTGCCAGATCCATTTTCCGGCTACCGAGAAAGAGGCCATCAGGGCGA
GAAAACGCTTTATTTTTGAGGAGCTGTTTTTGCTCCAGCTGGTCCTGGCCTTAAGGCGCAGGCAAATTACCCGGAAGTTA
AAACCGCACCGTTATCATGACCACGAAGACCTGGTGGGAAGATTTCTTTCCAGTTTGCCCTTTACCTTAACTCCCGGTCA
GCAGCGGGCCTGGGAAGAAATCAAAGCCGACATGGATGCTCCCTGGCCCATGAACCGGTTGTTGCAGGGAGACGTGGGGG
CGGGCAAAACTGTGGTCAGCACCCTGGCCCTACTCCGGGCCGTGGGTAGCGGACTGCAGGGAGCGCTAATGGTACCCACA
GAAATCCTGGCTGAACAGCATCACCTTACTCTCTCCCGGAGCCTGGCTTCCCTGGGAATAAAAGTTGGCCTGCTTTCAGG
GAGCATGAGAAAGAAGGAGAGGGAGAGACTGTTAGCCGGTCTCGCCTGCGGGGAGATACCCCTGGTGGTGGGTACTCATG
CTTTAATTCAAGAAAAAGTGCAGTTTAAATCACTGGCCCTGGTGGTTATTGACGAGCAGCACCGTTTTGGGGTGCGCCAG
AGGGCCATTTTACAATATAAAGGACACTGTCCGGACGTGCTAGTCATGACGGCGACACCCATTCCCCGTACCTTGGCCCT
TACCCTCTACGGGGATCTGGAGGTAAGCACTATTTCCGAACTGCCTCCCGGGCGGCGGCCGGTACAAACTTATGCTTTTC
CTTCTTCTCGTCTGCCTGATGTTTATGGCCTGGTGCGGCGGGAAGTGGAAAAGGGACACCAGGCTTATGTGGTTTGCCCC
CTGGTGGAGGAATCAGAAAAACTTGATGTCCGGGCTGCCGTAGAATTGATGGAGGAACTTTCCCGGGGCCCTCTGGCCGG
ATGCCGGCTGGGTTTGCTCCACGGCCGCTTGAAACCGGCGGAAAAAGAGGATGTGATGGAAGCCTTTCGCACGGGCCAAA
TCCAGGTACTGGTAACGACCAGCGTGGTGGAAGTTGGTGTGGATGTACCCAACGCCACGGTAATGGTGATCCTGGACGCC
GAGCGTTTCGGGCTGGCCCAGTTACACCAGTTGCGGGGGCGGGTGGGGCGGGGGAAAGCACAATCCTACTGTGTTCTGGT
TTCCGACAGCACCACCGAAGAAGCCCGCTACAGGTTGCAGGCGATGACCTCCACCACCGACGGCTTTGTCCTGGCGGAGA
AAGACTTACAGTTAAGGGGGCCGGGGGAACTTACGGGCACCAGGCAATCGGGGCTGCCTGAGTTTAAAATAGCCGACCTG
GTCCGGGACTGGCGCGCTCTGCAGCTTGCCCGGCAGGAAGCGGTAGCTTTAATAAAAAAAGATCCCGAGTTAAAAGCGCC
AGAACACCGCCTCCTGGCCCGGGAGTTGCGCTTAAGGTTTGGCGGGAAGGCGGGATACCTGGATATCGGTTAA

Protein sequence :
MVEVDFEQYPVQYLKMVGPRRFALLKRLGIRTVKDLLYHFPREYQERTVKPSYACAHGEQVTLQGRVVGVTELSPRSGLW
ITRVKVQEPTGHFFAVWFNQRYIKKLFTAGSRVQVTGKIERRFGEIQLLVADYELLEGEEPVPQEGIVPIYPLTEQLTQR
LMRSLMRLALDEWTPRINDFLPPGVRQKFFLPELPSALCQIHFPATEKEAIRARKRFIFEELFLLQLVLALRRRQITRKL
KPHRYHDHEDLVGRFLSSLPFTLTPGQQRAWEEIKADMDAPWPMNRLLQGDVGAGKTVVSTLALLRAVGSGLQGALMVPT
EILAEQHHLTLSRSLASLGIKVGLLSGSMRKKERERLLAGLACGEIPLVVGTHALIQEKVQFKSLALVVIDEQHRFGVRQ
RAILQYKGHCPDVLVMTATPIPRTLALTLYGDLEVSTISELPPGRRPVQTYAFPSSRLPDVYGLVRREVEKGHQAYVVCP
LVEESEKLDVRAAVELMEELSRGPLAGCRLGLLHGRLKPAEKEDVMEAFRTGQIQVLVTTSVVEVGVDVPNATVMVILDA
ERFGLAQLHQLRGRVGRGKAQSYCVLVSDSTTEEARYRLQAMTSTTDGFVLAEKDLQLRGPGELTGTRQSGLPEFKIADL
VRDWRALQLARQEAVALIKKDPELKAPEHRLLARELRLRFGGKAGYLDIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-91 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desku_1250 YP_004516634.1 ATP-dependent DNA helicase RecG BAC0356 Protein 8e-93 44