Name : Desku_1250 (Desku_1250) Accession : YP_004516634.1 Strain : Desulfotomaculum kuznetsovii DSM 6115 Genome accession: NC_015573 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1264733 - 1266805 bp Length : 2073 bp Strand : + Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: pth:PTH_1757 ATP-dependent DNA helicase RecG; SMART: DEAD-like helic DNA sequence : ATGGTTGAAGTTGATTTTGAGCAGTATCCCGTACAATATTTGAAAATGGTGGGACCACGCCGTTTTGCCCTGCTGAAGAG ATTGGGGATCAGGACGGTAAAAGATTTGCTTTACCACTTTCCCCGGGAATACCAGGAACGCACGGTAAAGCCGTCTTATG CCTGTGCCCATGGGGAACAGGTTACCCTGCAGGGAAGGGTTGTGGGAGTCACCGAGTTAAGCCCCAGATCCGGATTATGG ATCACAAGGGTAAAAGTGCAGGAACCGACGGGGCACTTTTTTGCCGTCTGGTTTAACCAGCGCTACATAAAAAAACTGTT TACTGCCGGCAGCCGCGTACAGGTTACGGGAAAAATTGAACGTCGCTTTGGAGAAATTCAGCTGCTGGTTGCCGATTATG AATTGTTGGAGGGCGAGGAGCCCGTACCACAGGAGGGTATAGTGCCTATTTATCCCCTTACGGAACAATTGACCCAGCGT CTCATGCGGTCCTTGATGCGCCTTGCCCTGGACGAGTGGACGCCCCGCATCAACGATTTCCTCCCCCCGGGGGTGCGGCA GAAATTTTTCCTGCCCGAGCTTCCCAGCGCCCTGTGCCAGATCCATTTTCCGGCTACCGAGAAAGAGGCCATCAGGGCGA GAAAACGCTTTATTTTTGAGGAGCTGTTTTTGCTCCAGCTGGTCCTGGCCTTAAGGCGCAGGCAAATTACCCGGAAGTTA AAACCGCACCGTTATCATGACCACGAAGACCTGGTGGGAAGATTTCTTTCCAGTTTGCCCTTTACCTTAACTCCCGGTCA GCAGCGGGCCTGGGAAGAAATCAAAGCCGACATGGATGCTCCCTGGCCCATGAACCGGTTGTTGCAGGGAGACGTGGGGG CGGGCAAAACTGTGGTCAGCACCCTGGCCCTACTCCGGGCCGTGGGTAGCGGACTGCAGGGAGCGCTAATGGTACCCACA GAAATCCTGGCTGAACAGCATCACCTTACTCTCTCCCGGAGCCTGGCTTCCCTGGGAATAAAAGTTGGCCTGCTTTCAGG GAGCATGAGAAAGAAGGAGAGGGAGAGACTGTTAGCCGGTCTCGCCTGCGGGGAGATACCCCTGGTGGTGGGTACTCATG CTTTAATTCAAGAAAAAGTGCAGTTTAAATCACTGGCCCTGGTGGTTATTGACGAGCAGCACCGTTTTGGGGTGCGCCAG AGGGCCATTTTACAATATAAAGGACACTGTCCGGACGTGCTAGTCATGACGGCGACACCCATTCCCCGTACCTTGGCCCT TACCCTCTACGGGGATCTGGAGGTAAGCACTATTTCCGAACTGCCTCCCGGGCGGCGGCCGGTACAAACTTATGCTTTTC CTTCTTCTCGTCTGCCTGATGTTTATGGCCTGGTGCGGCGGGAAGTGGAAAAGGGACACCAGGCTTATGTGGTTTGCCCC CTGGTGGAGGAATCAGAAAAACTTGATGTCCGGGCTGCCGTAGAATTGATGGAGGAACTTTCCCGGGGCCCTCTGGCCGG ATGCCGGCTGGGTTTGCTCCACGGCCGCTTGAAACCGGCGGAAAAAGAGGATGTGATGGAAGCCTTTCGCACGGGCCAAA TCCAGGTACTGGTAACGACCAGCGTGGTGGAAGTTGGTGTGGATGTACCCAACGCCACGGTAATGGTGATCCTGGACGCC GAGCGTTTCGGGCTGGCCCAGTTACACCAGTTGCGGGGGCGGGTGGGGCGGGGGAAAGCACAATCCTACTGTGTTCTGGT TTCCGACAGCACCACCGAAGAAGCCCGCTACAGGTTGCAGGCGATGACCTCCACCACCGACGGCTTTGTCCTGGCGGAGA AAGACTTACAGTTAAGGGGGCCGGGGGAACTTACGGGCACCAGGCAATCGGGGCTGCCTGAGTTTAAAATAGCCGACCTG GTCCGGGACTGGCGCGCTCTGCAGCTTGCCCGGCAGGAAGCGGTAGCTTTAATAAAAAAAGATCCCGAGTTAAAAGCGCC AGAACACCGCCTCCTGGCCCGGGAGTTGCGCTTAAGGTTTGGCGGGAAGGCGGGATACCTGGATATCGGTTAA Protein sequence : MVEVDFEQYPVQYLKMVGPRRFALLKRLGIRTVKDLLYHFPREYQERTVKPSYACAHGEQVTLQGRVVGVTELSPRSGLW ITRVKVQEPTGHFFAVWFNQRYIKKLFTAGSRVQVTGKIERRFGEIQLLVADYELLEGEEPVPQEGIVPIYPLTEQLTQR LMRSLMRLALDEWTPRINDFLPPGVRQKFFLPELPSALCQIHFPATEKEAIRARKRFIFEELFLLQLVLALRRRQITRKL KPHRYHDHEDLVGRFLSSLPFTLTPGQQRAWEEIKADMDAPWPMNRLLQGDVGAGKTVVSTLALLRAVGSGLQGALMVPT EILAEQHHLTLSRSLASLGIKVGLLSGSMRKKERERLLAGLACGEIPLVVGTHALIQEKVQFKSLALVVIDEQHRFGVRQ RAILQYKGHCPDVLVMTATPIPRTLALTLYGDLEVSTISELPPGRRPVQTYAFPSSRLPDVYGLVRREVEKGHQAYVVCP LVEESEKLDVRAAVELMEELSRGPLAGCRLGLLHGRLKPAEKEDVMEAFRTGQIQVLVTTSVVEVGVDVPNATVMVILDA ERFGLAQLHQLRGRVGRGKAQSYCVLVSDSTTEEARYRLQAMTSTTDGFVLAEKDLQLRGPGELTGTRQSGLPEFKIADL VRDWRALQLARQEAVALIKKDPELKAPEHRLLARELRLRFGGKAGYLDIG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-91 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Desku_1250 | YP_004516634.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 8e-93 | 44 |