Gene Information

Name : Desku_1244 (Desku_1244)
Accession : YP_004516628.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1259543 - 1260718 bp
Length : 1176 bp
Strand : +
Note : TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: pth:PTH_1761 pyrimidine reductase and pyrimidine deaminase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding

DNA sequence :
ATGCCCATTAGCCCTGAAGGTTGCTCGCCAAATCGGGGCTTTTTCTATTTTGTTTTGCAGGTGAGGGCGTTGGACGAATA
CTACATGCAAATGGCTTTGGACCTGGCCCGGCGGGCCCTGGGCAGAACCAGCCCCAATCCCATGGTGGGGGCGGTGCTGG
TAAAAGATGGCCAGGTAATTGGCCGGGGCTACCATGCCCGGGCCGGCACTCCCCATGCCGAGATTCACGCGTTAAATGAA
GCCGGGGAACAAGCTGCGGGAGCCACCCTTTATGTTACCCTGGAACCGTGTTGCCACCGGGGACGCACAGGTCCCTGCAC
CGAGGCGATTCTGGATGCCGGCGTCAAGCGGGTGGTGGCTGCCATGACCGATCCCAATCCCCTCGTTGCCGGACGGGGGT
TGGAGCGGTTGCGCCAAGCCGGGGTTGAGGTGACCGTAGGAGTGATGGAGGAAGAGGCGCGGAAATTAAATGAAGTTTTT
GTAAAGTATATCACTACCCGTAGACCCTTCGTGGTTTTAAAGGCGGCTATGAGCCTGGACGGTAAAATAGCCACCCGTAC
CGGGGAATCCCGCTGGATTACCGGCCCCCGGGCCCGGCTGGCCGTACACCGCCTCCGGGATCGTTATGACGCCATCCTGG
TTGGTGTAAATACAGTGCTGAAGGACAACCCTTCCCTGACCACCCGTATTTCGGGTGAGAATGGTAAGGACCCGGTGCGG
ATCATTGTAGACAGCCTGGCCCGTACTCCTCCAGACGCCAGGGTGATTACCCAGCAATCTCCGGCACCAACCATTGTCGC
TGTGACGGAAAGGGCGCCCGTACAAAACCTGCGCCGGCTGGAGGAAGCCGGGGCGCAGGTACTGGTGGTACCCGGTCCTG
GACTCCGGGTGGATCTCGAGGTTTTAATGAAGGAACTGGCCCGCCGGGAGATAACCAGCGTGCTGGTGGAGGGGGGCGGC
GAAATTCACGCCTCTTTCCTGAAATCCCGCCTGGTAGATAAAGTGGTCTGGTTTATTTCCCCCCTAATTATTGGTGGACG
CCAGGCGCCCGGGCCTGTGGGCGGGGAAGGGCCGGCCCGGCTGGCCGAAGCAGTGCGATTGAAAGATGTTTCCTTAACCC
GTTACGGGGGGGACTTCTGTGTGGAGGGGTATGTGGATGGCGGGGGTGAAGATTGA

Protein sequence :
MPISPEGCSPNRGFFYFVLQVRALDEYYMQMALDLARRALGRTSPNPMVGAVLVKDGQVIGRGYHARAGTPHAEIHALNE
AGEQAAGATLYVTLEPCCHRGRTGPCTEAILDAGVKRVVAAMTDPNPLVAGRGLERLRQAGVEVTVGVMEEEARKLNEVF
VKYITTRRPFVVLKAAMSLDGKIATRTGESRWITGPRARLAVHRLRDRYDAILVGVNTVLKDNPSLTTRISGENGKDPVR
IIVDSLARTPPDARVITQQSPAPTIVAVTERAPVQNLRRLEEAGAQVLVVPGPGLRVDLEVLMKELARREITSVLVEGGG
EIHASFLKSRLVDKVVWFISPLIIGGRQAPGPVGGEGPARLAEAVRLKDVSLTRYGGDFCVEGYVDGGGED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-48 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-48 41