Gene Information

Name : Desku_0007 (Desku_0007)
Accession : YP_004515458.1
Strain : Desulfotomaculum kuznetsovii DSM 6115
Genome accession: NC_015573
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 14554 - 15438 bp
Length : 885 bp
Strand : +
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: pth:PTH_0009 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; Indole-3-glycerol phosphate synthase

DNA sequence :
GTGGCGGAGAAGGGAACCTGGACCGTAAAAAAAGGCCTGGCGGAAATGCTTAAAGGCGGCGTGATTATGGACGTTACCAC
ACCGGAACAGGCCAAGATCGCCGAAGAAGCCGGTGCCTGTGCCGTAATGGCCCTGGAGCGGGTGCCTGCCGATATCCGGG
CAGCCGGCGGTGTGGCCCGCATGGCCGACCCGACTGTGATTTTGCGCATCATGGATGCCGTAACCATTCCGGTAATGGCC
AAGGTTCGCATTGGTCATTTTGTGGAGGCGCAAATTTTAGAGCAACTGGGTGTGGATTACATAGATGAAAGTGAAGTGCT
TACCCCGGCGGACGAACAGCATCACATTGACAAGCATAAGTTCAAGGTGCCCTTTGTCTGTGGCGCCCGCAACCTGGGTG
AAGCCCTGCGGCGCATTGCTGAAGGCGCGGCGATGATCCGGACCAAAGGGGAACCGGGCACCGGCAACGTGGTGGAAGCC
GTGCGCCACATGCGCATGATGATGGCCGAAATTCGCCGGGTGCAGAATATGCCCCGGGAGGAACTGATGGCCCTGGCCAA
GGAGATGGGCGCCCCATATGAACTGTTGCTGCAGGTGGCCGAGCAGGGGCGCCTGCCGGTGGTGAACTTTGCTGCCGGCG
GCATCGCCACCCCGGCAGACGCCGCCCTGATGATGCAGCTGGGTGCCGACGGCATTTTTGTGGGTTCGGGCATTTTCAAA
TCCAAGAACCCCTCGGCCCGGGCCCGGGCCATCGTGGCGGCCACCACCCACTACAACGACCCGCAGGTCCTGGCCGAGGT
GTCCAAGGATCTGGGCGAAGCCATGCCCGGACTGGAGATCGCCACCATTGCTCCCGAACAGAGGATGCAGGATCGCGGCT
GGTAA

Protein sequence :
MAEKGTWTVKKGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPTVILRIMDAVTIPVMA
KVRIGHFVEAQILEQLGVDYIDESEVLTPADEQHHIDKHKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEPGTGNVVEA
VRHMRMMMAEIRRVQNMPREELMALAKEMGAPYELLLQVAEQGRLPVVNFAAGGIATPADAALMMQLGADGIFVGSGIFK
SKNPSARARAIVAATTHYNDPQVLAEVSKDLGEAMPGLEIATIAPEQRMQDRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-88 69
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-88 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-88 69