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Name : Metme_0903 (Metme_0903) Accession : YP_004511841.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 970968 - 972509 bp Length : 1542 bp Strand : + Note : TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; KEGG: tgr:Tgr7_0226 general secretory pathway protein E; SMART: ATPase, AAA+ type, core DNA sequence : ATGCCGGTGCATTGGATTTGGAACCCTGAGATGCTGGCCGGCGAATTACCCGAGTTAATCACCGCCGCTTGGCGGGCGCC GAGTTACGGTTTTGCCAAGCGCTTCGGCATCATCGTCGCCGGCGATGACGATCAGTCGCTCTGCTTGCTGTATCGGCAGG ACGCCCCGGTTACCGCCTTGTTGGAGGTTCGGCGCCTGCTGAATCAACCCGTATCGCTCAAGTTATTATCCGAACAGGAT TTCGAGCGCCGGTTGCAGGCGGCTTACGAACATAAATCCGGCCATGCCCAGCAAATGGTCAACGATCTGCACGAAAATGT GGATTTGTCGGATATGGCCCAACATCTGCCCAAGCCGGAAGACTTGCTGGAAAGCGAAGACGAAGCGCCCATCATCCGCC TGATCAATGCGCTGCTGACCGAAGCCATCAAGGAAAACGCCTCGGATATTCACATCGAACCCTACGAATCGCGCATGGTG GTGCGCTTTCGCGTCGATGGTGTGCTGCGCGAGATTATCGAGCCGCAACGCGAATTTGCCCCCATGGTGATTTCGCGCTT GAAAGTGATGGCCAAACTCGATATTGCTGAAAAACGCCTGCCGCAGGACGGGCGTATTTCCCTGAATATCGGCGGCCGTA CCGTCGATGTGCGGGTATCGACTTTGCCGTCCGGCCACGGCGAGCGGGTGGTTTTGCGTTTGCTGGACAAGCAGGCCAAT CAATTGAATCTGAAACAGGTCGGCATGGCGCAACGGGAGCTGGACTGCATTCAAGGCATGATCGCCCGTCCGCACGGCAT TATCCTGGTCACCGGCCCCACCGGCTCCGGTAAAACCACCAGCTTGTACGCCATCGTCAATCAGCTCAATCAGCGTAGCC GCAATATTCTGACGGTGGAAGACCCGATCGAATATTACCTGGACGGCATCGGCCAGACCCAGGTCAACAGCAAGGTGGAG ATGACCTTTGCCAAGGGCTTGCGGGCCATCTTGCGGCAAGACCCGGATGTGGTGATGGTGGGCGAAATTCGCGACCGGGA AACCGCTGAAATCGCCGTGCAGGCCAGTTTGACCGGTCATTTGGTGTTGTCCACGCTGCATACCAACACCGCTGTCGGCG CCATTACCCGCCTGCGCGATATGGGCGTTGAGCCGTTTTTGCTGGCCTCCAGCTTGGTCGGGGTGATCGCCCAACGGCTG GTGCGGGTGTTGTGTCCGCATTGCAAGCAACCGGCCGGCGTGGAAGGGCGAGACTTGTTCAGACTGGGCTATATCGGCCC CCAATATGAAACCGTCAGCGTCTATCAGCCGCAAGGTTGTCCCTTGTGTTACGGACACGGTTACAAAGGCCGAGCCGGCA TTTTCGAGCTGATACCGCTGGATAACCAGATGGCGAAACTGATCCATGAAGGCGCCGGCGATATGGCTTTGGAGCAGCAT GCCCGCCTGTTGGCGCCTAGTATTCAACAGAGTGCGTTGGATAAGGTTTTGGCCGGGGAAACCAGTCTCGACGAAGCCTT GCGTATGACGCTAAAGGATTAA Protein sequence : MPVHWIWNPEMLAGELPELITAAWRAPSYGFAKRFGIIVAGDDDQSLCLLYRQDAPVTALLEVRRLLNQPVSLKLLSEQD FERRLQAAYEHKSGHAQQMVNDLHENVDLSDMAQHLPKPEDLLESEDEAPIIRLINALLTEAIKENASDIHIEPYESRMV VRFRVDGVLREIIEPQREFAPMVISRLKVMAKLDIAEKRLPQDGRISLNIGGRTVDVRVSTLPSGHGERVVLRLLDKQAN QLNLKQVGMAQRELDCIQGMIARPHGIILVTGPTGSGKTTSLYAIVNQLNQRSRNILTVEDPIEYYLDGIGQTQVNSKVE MTFAKGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTLHTNTAVGAITRLRDMGVEPFLLASSLVGVIAQRL VRVLCPHCKQPAGVEGRDLFRLGYIGPQYETVSVYQPQGCPLCYGHGYKGRAGIFELIPLDNQMAKLIHEGAGDMALEQH ARLLAPSIQQSALDKVLAGETSLDEALRMTLKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-133 | 58 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-134 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Metme_0903 | YP_004511841.1 | general secretory pathway protein E | VFG1876 | Protein | 6e-139 | 61 |
| Metme_0903 | YP_004511841.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-140 | 60 |
| Metme_0903 | YP_004511841.1 | general secretory pathway protein E | VFG2048 | Protein | 1e-135 | 58 |
| Metme_0903 | YP_004511841.1 | general secretory pathway protein E | VFG2426 | Protein | 5e-80 | 48 |
| Metme_0903 | YP_004511841.1 | general secretory pathway protein E | VFG0112 | Protein | 5e-82 | 45 |
