Gene Information

Name : Metme_0853 (Metme_0853)
Accession : YP_004511791.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Virulence
Product : type VI secretion system effector
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 918983 - 919465 bp
Length : 483 bp
Strand : +
Note : KEGG: azo:azo3897 cytoplasmic protein SciM; TIGRFAM: Type VI secretion system effector, Hcp1; PFAM: Virulence factor, secretion apparatus

DNA sequence :

ATGGCAGTTGATATGTTTTTGAAAATCAAAGATGTAAAAGGTGAAGCACAGGACGACAAGCACAAAGATACCATCGACGT
GCTGGCCTGGAGTTGGGGGATGTCCAATAGTGGCTCAACTCATATGGGTGGTGGTTCCGGCGCTGGAAAAGTCAATGTGC
AGGATATCAGTGTAACTAAATACATTGACAAAAGTAGTCCTGATCTGATGAAGGCATGCTGCAACGGTAAACACTTTGAG
ACAGCGGATTTAATCGTCCGTAAAGCGGGTGAGAAACCGGTTGAGTATTTAACCATTACGATGACGGATTTGATCGTGAC
TTCTGTTTCCACTGGCGGCTCGGGCGGTGAAGATCGTTTGACCGAAAATGTCACGCTTAACTTCGGTGCAGTCAAAGTTA
AATACATCGAACAAACCGCGAAAGGCGGTGAAGGCGCGAAACCCGACATGGGTTGGGATATTGCGGCAAACAAAGCGCTT
TAA

Protein sequence :

MAVDMFLKIKDVKGEAQDDKHKDTIDVLAWSWGMSNSGSTHMGGGSGAGKVNVQDISVTKYIDKSSPDLMKACCNGKHFE
TADLIVRKAGEKPVEYLTITMTDLIVTSVSTGGSGGEDRLTENVTLNFGAVKVKYIEQTAKGGEGAKPDMGWDIAANKAL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	1e-26	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Metme_0853	YP_004511791.1	type VI secretion system effector	VFG2071	Protein	2e-31	67