Gene Information

Name : Metme_0743 (Metme_0743)
Accession : YP_004511684.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 795067 - 797079 bp
Length : 2013 bp
Strand : +
Note : TIGRFAM: Transketolase, bacterial-like; KEGG: mca:MCA3046 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal

DNA sequence :
ATGCCTTCGCGCCGAGACTTAGCGAACGCCATCCGCGCACTCAGCATGGACGCCGTACAAAAAGCCAACTCAGGACACCC
TGGAGCCCCGATGGGGATGGCTGACATCGCAGAAGTATTGTGGAACGACTTTCTGCAACACAACCCCACCAATCCGAAAT
GGCCCAACCGCGACCGCTTTGTGCTGTCCAACGGCCACGGTTCCATGCTGATTTATTCGCTGTTGCACTTGGCCGGCTAC
AACCTGCCGATCGAACAACTGCAACAGTTCCGCCAACTGCACTCGCAAACCCCGGGCCACCCCGAATACGGTTACACCGA
CGGTGTGGAAACCACTACCGGTCCCCTGGGACAAGGCATCACCAATGCCGTGGGTTTCGCCTTGGCTGAACGCACCCTGG
CCGGTCAATTCAACCGTCCCGGTCACAGCATCGTCGACCACCACACCTACGTTTTCCTGGGCGACGGCTGCCTGATGGAA
GGCATCTCCCACGAAGCCTGCTCGCTGGCCGGCTCCATGGGGCTGGGTAAACTGATCGCCTTCTACGACGACAACAACAT
CTCCATCGACGGCGAAGTACGCGGCCACGGCAACGTCCACGGCTGGTTCCTGGACAACACCCCGCAACGCTTCGAAGCCT
ACGGTTGGCACGTGATCCCGAAAGTCGACGGTCACAACCCCGACGCCGTGAAAAAAGCCATCGAAGCAGCCAAAAAAGTC
ACCGACAAACCGACCATCATCTGCTGCCAAACCACCATCGGTTTCGGCTCGCCGAACAAACAAGGCAAAGAAGAATGCCA
CGGTGCGGCCCTGGGCGAAGCCGAAATTGCCCTGACCCGCGAAAATCTGGGCTGGCCGCATGCGCCGTTCGAAATTCCGG
CCGACATCAAAGCCGGTTGGGACGCCACCAGCAAAGGTGCCCGTCTGGAAAGCGACTGGAACGACAAATTCGCCGCCTAC
AAAGCCGCGCATCCTGAGTTGGCCGCCGAATTCGAACGCCGCATGGCCGGTGAACTGCCTGCCGACTGGCAAGAAAAAGC
TAATGCCTTCATTGCCGCGGTCGATGCCAAAGGCGAAACCATCGCCAGCCGCAAAGCCTCGCAAAACACCCTGAACGGCT
TTGGCCCGCTGCTGCCCGAACTGATGGGCGGTTCCGCCGACCTGGCCGGCTCCAACCTGACCCTGTGGTCAGGCTGTAAA
GACGTCAATGTCGACGCTCACGACGGCAACTACGTCTACTACGGCGTCCGCGAATTCGGCATGAGCGCCATCATGAACGG
CATTATGCTGCACGGCGGCTTCAAACCCTACGGCGCCACCTTCCTGATGTTCTCGGAATACGCCCGTAACGCCCTGCGTA
TGGCCGCCCTGATGAAAGCGCCCACCATCTTCGTCTACACCCACGACTCCATCGGTCTGGGCGAAGACGGTCCGACCCAC
CAACCGATCGAACAAACCGCCACCCTGCGTATGATACCCAACATGCAGGTCTGGCGTCCGTGCGACGCGGTCGAGTCGGC
CGTATGCTGGAAAGCCGCCATCGAACGACAAGACGGCCCCAGCACCCTGATCTTCTCCCGTCAAAACCTGGCGCACATGA
GTCGCACGCAAGCGCAGATCGACGCGATCAGCAAAGGCGGCTACATCCTGCGCGACAGCCAAGGCACCCCCGACGCCATC
ATCATCGCCACCGGCTCCGAAGTCGAACTGGCCGTGAAAGCAGCGGAAGCCCTGGCCAGCAAAGGCAAACAAATTCGCGT
GGTCTCCATGCCGTCCACCAACGTCTTCGAAGCGCAAGACCAAGCGTATAGAGACAGCGTACTGCCGCCTAGCGTCAGCC
AACGCGTGGTGGTGGAAGCCGGTGTCACCGATAGCTGGTGGAAATATGCCGGCAGCCATGGCAAAATCGTCGGCCTGGAC
CGTTTCGGCGAATCCGCACCGGCAGGTCAACTCTTCAAAGAGTTCGGCTTTACCGTGGATAATGTCGTCGCCAACGTCGA
AGCTGTGCTTTAA

Protein sequence :
MPSRRDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLQHNPTNPKWPNRDRFVLSNGHGSMLIYSLLHLAGY
NLPIEQLQQFRQLHSQTPGHPEYGYTDGVETTTGPLGQGITNAVGFALAERTLAGQFNRPGHSIVDHHTYVFLGDGCLME
GISHEACSLAGSMGLGKLIAFYDDNNISIDGEVRGHGNVHGWFLDNTPQRFEAYGWHVIPKVDGHNPDAVKKAIEAAKKV
TDKPTIICCQTTIGFGSPNKQGKEECHGAALGEAEIALTRENLGWPHAPFEIPADIKAGWDATSKGARLESDWNDKFAAY
KAAHPELAAEFERRMAGELPADWQEKANAFIAAVDAKGETIASRKASQNTLNGFGPLLPELMGGSADLAGSNLTLWSGCK
DVNVDAHDGNYVYYGVREFGMSAIMNGIMLHGGFKPYGATFLMFSEYARNALRMAALMKAPTIFVYTHDSIGLGEDGPTH
QPIEQTATLRMIPNMQVWRPCDAVESAVCWKAAIERQDGPSTLIFSRQNLAHMSRTQAQIDAISKGGYILRDSQGTPDAI
IIATGSEVELAVKAAEALASKGKQIRVVSMPSTNVFEAQDQAYRDSVLPPSVSQRVVVEAGVTDSWWKYAGSHGKIVGLD
RFGESAPAGQLFKEFGFTVDNVVANVEAVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 69
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 62