Gene Information

Name : Metme_0612 (Metme_0612)
Accession : YP_004511556.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine sulfhydrylase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 661386 - 662567 bp
Length : 1182 bp
Strand : +
Note : KEGG: mca:MCA2488 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme

DNA sequence : 
ATGACAGATTTTGATTGGCGGGATTATTCCTTGGAGACGCAGGCTATCAGAGCAGGACAGCGGCGAACTCACGAAGACGA
GCACAGCATTCCGATATTCGCCACGTCCAGTTATGTGTTCGAATCCGCCGAACAGGCCTCTTTGCGTTTTACCGGCAAGC
AGCCGGGCAATATTTATTCGCGCTTTACCAATCCTACCGTGAGCGCATTTCAGCAGCGTTTGGCCTTGATGGAGCGCGGA
GAACGCTGTTTGGCGTTTTCTTCCGGTATGGCGGCGATCATGGCGGTGGGAATGGCTTTGTTAAAGGCGGGCGATCATGT
GGTGTGTTCGCGTAGCGTGTTCGGTAATACGGTGTTAACCTTTCAAAACTATTTCGGCAAATTCGGCGTGGCTTGCGATT
TTGTCGGTTTGACGGATCTGTCGGCCTGGGAAGCGGCCATTCAACCAAATACCCGCTTTCTGTTTTTGGAAACACCGTCC
AATCCCTTGATTGAAATCGCCGATATCCAGGCCTTGGCAGACATCGCGCACCGGCATGGTTGTCTGTTAGTCGTCGATAA
TTGTTTTTGTACCCCGGTGTTGCAGCAACCCTTGGCTTTGGGCGCGGATTTGGTGGTGCAATCGGCAACCAAATTCATTG
ACGGGCACGGGCGTTGCGTGGGCGGCGCCGTGATCGGCAGCGAAGAGTTGATTGAAAAGGACATTTACCCGTATCTGCGT
ACCGGTGGTGCCAGCATGAGTCCGTTTAACGCCTGGGTATTTCTATCCGGTTTGGAAACCTTGGCGATACGTATGAAAGC
GCATTGCGATAATGCCTTTACCTTAGCCGCGTGGCTGGAAACCCAGCCGGGTATCGCCAAAGTACATTATCCCGGTCTAG
CGTCTCATGCTCAGCATGAATTGGCCCGGCGCCAGCAAAGCCATTTTGGCGCGGTGGTCAGTTTCGAGTTGACCGGCGGC
AAGGAGCAGGCTTGGAAACTGATCGATGCCACCCGTATGTTGTCGATTACCGCTAATCTGGGCGATGTAAAAACCACGAT
CACCCATCCCGCCACCACGACCCATGGCAGGCTCAGCCCCGAAGCGAGGGCAGAGGCCGGCATCACCGATGGTTTGGTTA
GGGTGTCGGTGGGATTGGAGAATATCGAAGACATTAAGGCTGATTTATTAAGGGGCTTTTAG

Protein sequence : 
MTDFDWRDYSLETQAIRAGQRRTHEDEHSIPIFATSSYVFESAEQASLRFTGKQPGNIYSRFTNPTVSAFQQRLALMERG
ERCLAFSSGMAAIMAVGMALLKAGDHVVCSRSVFGNTVLTFQNYFGKFGVACDFVGLTDLSAWEAAIQPNTRFLFLETPS
NPLIEIADIQALADIAHRHGCLLVVDNCFCTPVLQQPLALGADLVVQSATKFIDGHGRCVGGAVIGSEELIEKDIYPYLR
TGGASMSPFNAWVFLSGLETLAIRMKAHCDNAFTLAAWLETQPGIAKVHYPGLASHAQHELARRQQSHFGAVVSFELTGG
KEQAWKLIDATRMLSITANLGDVKTTITHPATTTHGRLSPEARAEAGITDGLVRVSVGLENIEDIKADLLRGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-53 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metme_0612 YP_004511556.1 O-succinylhomoserine sulfhydrylase BAC0207 Protein 4e-67 43