Gene Information

Name : Metme_0490 (Metme_0490)
Accession : YP_004511434.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 522695 - 524974 bp
Length : 2280 bp
Strand : +
Note : KEGG: mca:MCA1032 S1 RNA-binding domain-containing protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold

DNA sequence :
ATGGACGTTATCCAGCGTATTGCCGAAGAACTCTCCGTTAAATCCCAGCAGGTAGCCGCAGCCGTGGCCTTGCTGGACGA
AGGCGCCACCGTGCCTTTTATTTCCCGTTATCGAAAAGAAGCGACCGGCGGACTGGACGATACGCAATTGCGGATGCTGC
AAGAGCGCTTGATTTATTTGCGCGAACTCAACGATAGGCGCAAAACCATTCTCGACAGTATCGCTTCCCAGGGCAAGCTT
AGTCCGGAGTTGGAAACAGCCATATTGGAAGCGGATACTAAAACCCTCTTGGAGGATTTGTATCTGCCCTACAAGCCCAA
ACGCCGCACTAAGGCGCAAATCGCCCGCGAGGCGGGGCTGGAGCCTCTGGCGGATGCATTATTGGCGGATCGCGGACTGG
TACCCGAACAAGAGGCTGTCGCCTATATAAACGCAGAGATGGGGGTGGCCGATGCCGCTGCCGCGTTGGATGGCGCCAGA
CAAATCATCATGGAGCGAATTTCCGAGGATGCCGACTTATTGGCCGAACTGCGCGAGCGTATCTGGCGTAAAGGGATATT
GCATGCCAGTGTCGTCAGCGGCAAGGAAGCGGAAGCCGCCAAATTCAAGGATTATTTCGACTATAGTGAAGCGATCAATA
AAATTCCTTCTCATCGGGCACTGGCATTATTCCGCGGCAGAAACGAAGACCTGCTGAGCCTGACATTGTTGCCGGCCGAA
TTGGATCAGGAAGAGCACCAACTATGCACACAATTCGTGTCGCAACGGTTAAACGTAAGCGATATCAGCCGACCCGCCGA
TGCCTGGCTGGCCGAAACGGCGCGATTTGCCTGGAAAATCAAGCTATTTACCCGCATAGATTTGGACTTGAAGCTGCGGC
TGCGAGAAGCGGCGGAGCTGGAGGCTATCCGGGTGTTCGCCAGCAACTTGCGCGATTTGCTGCTGACCGCACCGGCCGGA
CATAAGGCGACCATGGGCCTCGATCCCGGGATTCGTACCGGCGTTAAAGTCGCGGTCGTGGATGCCACCGGCAAAGTTCT
GGCTACCGACACTATCTATCCGCATGCGCCGAAAAACCAGTGGGACCAATCGATCTCGGTACTGGCGCGCCTGATAAAAC
AGCACCAAGTCAGTTTGGTGAGTATCGGTAACGGCACGGCGTCGCGCGAGACCGATCAATTAGTGGCCGACTTGATGAAA
CAGCATAAAGACCTGCCGATCCAGAAAATCACCGTCTCGGAGGCGGGCGCGTCGGTGTATTCCGCGTCGGAACTGGCGGC
CAAGGAGTTTCCGGATTTGGACGTATCCCTGCGCGGCGCCGTGTCCATTGCCCGCCGCCTGCAGGATCCGCTGGCGGAAT
TGGTGAAAATAGACCCTAAATCCATCGGCGTCGGCCAATATCAGCACGATGTTAACCAAGTGCAACTGGCGCGTATGCTG
GATACCGTGGTGGAAGACTGCGTAAATGCGGTAGGCGTGGATGTGAATACCGCCTCGGCGGCCTTGCTGAAACAGGTGTC
GGGATTGTCGGCCAGTATCAGCGAGAATATTGTGGCTTTCCGCAATCAAAACGGCCCATTTGCCAATCGCAGTCAATTGA
AAAAAGTGCCGCGCTTAGGCGATAAGGCATTTGAACAGGCTGCCGGGTTTTTACGCGTCATGAACGGTGACAATCCGTTG
GACGCGTCCGCCGTGCACCCGGAGGCCTACCCGGTAGTGAATGCGATTTTGGACGATACCGGCAAATCGATCCGCGATTT
GATCGGTCAAAGCCAATTCTTGCGCAGCCTGAATCCCGCCAGCTACACCAGCGCCGCATTCGGTTTGCCGACAGTCAGCG
ATATTCTGCAGGAATTGGAAAAGCCCGGCCGCGACCCTCGCCCCGAATTCAAAAGTGTGCAATTCAAGGAGGGAGTGGAA
AAGATCACCGATTTGCAACCGGGCATGAGGTTGGAGGGCGTAGTCACCAATGTGGCCAATTTTGGCGCGTTCGTGGATAT
CGGTGTGCACCAGGACGGTTTGGTGCATATTTCTCATCTGGCGGACGACTTTGTTAAAGACCCGCGCAGCGTGGTTAAAA
CCGGTGACATGGTCAATGTGCGGGTGCTGGAAGTGGATGTGGCTCGGCAGCGGATATCGCTGAGTATGAAAAAAAACGTC
GACAATAGTGAGATTGTGCGCAGCGAAAAGCCGCAAAAAACCAGTCACAAGCCTGGCAAGCCGCAACCTATTTTACAAAA
CAGCATGAGTAACGCCTTTGCCAAGGCGCTGAAAAAATAA

Protein sequence :
MDVIQRIAEELSVKSQQVAAAVALLDEGATVPFISRYRKEATGGLDDTQLRMLQERLIYLRELNDRRKTILDSIASQGKL
SPELETAILEADTKTLLEDLYLPYKPKRRTKAQIAREAGLEPLADALLADRGLVPEQEAVAYINAEMGVADAAAALDGAR
QIIMERISEDADLLAELRERIWRKGILHASVVSGKEAEAAKFKDYFDYSEAINKIPSHRALALFRGRNEDLLSLTLLPAE
LDQEEHQLCTQFVSQRLNVSDISRPADAWLAETARFAWKIKLFTRIDLDLKLRLREAAELEAIRVFASNLRDLLLTAPAG
HKATMGLDPGIRTGVKVAVVDATGKVLATDTIYPHAPKNQWDQSISVLARLIKQHQVSLVSIGNGTASRETDQLVADLMK
QHKDLPIQKITVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQVQLARML
DTVVEDCVNAVGVDVNTASAALLKQVSGLSASISENIVAFRNQNGPFANRSQLKKVPRLGDKAFEQAAGFLRVMNGDNPL
DASAVHPEAYPVVNAILDDTGKSIRDLIGQSQFLRSLNPASYTSAAFGLPTVSDILQELEKPGRDPRPEFKSVQFKEGVE
KITDLQPGMRLEGVVTNVANFGAFVDIGVHQDGLVHISHLADDFVKDPRSVVKTGDMVNVRVLEVDVARQRISLSMKKNV
DNSEIVRSEKPQKTSHKPGKPQPILQNSMSNAFAKALKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 59