Gene Information

Name : Metme_4371 (Metme_4371)
Accession : YP_004515218.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Unknown
Product : Ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 4800443 - 4801174 bp
Length : 732 bp
Strand : +
Note : PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: mca:MCA3024 ribonuclease PH

DNA sequence :
ATGAGACCAAGCGGACGCAACCCGGATCAACTGCGCGATATACGTTTTACCTGCCATTACACCAAACACGCGGAAGGATC
TGTTTTAGTCGAATTCGGCGATACCCGGGTGTTGTGCACCGCCAGTGTCGACAATAACGTCCCGCGCTTTTTAAAAGGTA
AAGGCGAAGGCTGGGTAACCGCGGAATACGGCATGCTGCCGCGTTCCACGCACAGCCGCATGGACAGGGAAGCCGGCCGC
GGCAAGCAAGGCGGGCGGACGCTGGAAATTCAGCGCTTGATCGGCCGTTCGCTGCGGGCCGCGCTGGATATGAAAGCGCT
GGGCGAGCATACCATCACCATCGATTGCGATGTCATACAAGCCGACGGCGGCACCCGTACCGCTTCGATTACCGGCGGCT
TTGTGGCGTTATCGATTGCGATCGAACATTTGTTAAAAACCAACCGTATCAAAAAAAATCCCCTGCACGGTCAAGTGGCA
TCCGTATCGGTAGGCATTTTTAGCGGCGTCCCGGTATTGGACCTGGATTACGCCGAGGACAGCCAAGCTGAAACCGACAT
GAACGTGGTGATGAACGAAGCCGGAAACTTTATAGAAGTACAAGGCACGGCCGAAGGCCACGCCTTTAGAAAAGACGAGC
TCAACGCCATGCTGGAGCTGGCCGAACACGGTATTAACCAATTGCTTGCCAAACAGCAGGAAGCGCTGGAAATCGCCAAA
CAACCCCGTTAA

Protein sequence :
MRPSGRNPDQLRDIRFTCHYTKHAEGSVLVEFGDTRVLCTASVDNNVPRFLKGKGEGWVTAEYGMLPRSTHSRMDREAGR
GKQGGRTLEIQRLIGRSLRAALDMKALGEHTITIDCDVIQADGGTRTASITGGFVALSIAIEHLLKTNRIKKNPLHGQVA
SVSVGIFSGVPVLDLDYAEDSQAETDMNVVMNEAGNFIEVQGTAEGHAFRKDELNAMLELAEHGINQLLAKQQEALEIAK
QPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 9e-69 60