Gene Information

Name : Metme_4113 (Metme_4113)
Accession : YP_004514965.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 4536234 - 4537160 bp
Length : 927 bp
Strand : +
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: mca:MCA3060 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase

DNA sequence : 
TTGGCAGATAAAACAATTCGTATCGCAACCCGGCAAAGTCCGCTGGCGCTATGGCAGGCGGAGCATGTCGCGGCAAGATT
GGCACAGGCATTTCCCGGCTTGAAAACCGAACTGGTAAAAATGGTCACACGCGGCGACAAGATATTGGATGCGCCGTTGG
CCAAAGTCGGCGGCAAGGGCTTGTTCGTCAAGGAACTGGAGCAAGGCTTGCTGGAAGGTACAGCGGATATTGCGGTGCAT
TCCATGAAAGACGTGCCGGTGGAATTTCCGGATGGACTGCATTTGGCCGTGATCATGAACAGAGAAGACCCGACCGACGC
CTTCGTTTCCAACCGTTACGGCAGCTTGGCCGATTTGCCGGCCAATGCCCGCATCGGCACTTCCAGCCTGCGCCGCCAGT
GCCAGATTAAGGAAAAGTTTCCGCACGCGGAAATTTTGAGCCTGCGCGGTAACGTCAACACTCGTCTGGCCAAACTGGAT
GCAGGCGAATACGACGCTATAATTTTGGCCTCCGCCGGCTTGAAACGGCTGGGCATGGGAGAACGTATCACCGCACAGTT
AAGCCCTGAAGAAAGCCTGCCAGCCATGGGTCAAGGCGCAATCGGCATCGAATGCCGTATCGATGATGCCGACATTCACG
ATTATTTAAAGGTGTTGCACGACGAAGCCACCAGCATACGCGTCGGCGCGGAACGCGCCATGAATGCCCGCTTGAACGGC
GGCTGCCAGGTGCCGATTGCCGGCTTTGCCGAAATTCGAGCCGACAGGCTGTTCATGCGCGGACTGGTCGGCCATCCGGA
CGGCAGCGTCTTGTATCGCGCCGAAGCGGAACGCCCCCTGGCTGAAGCGGAACAATTGGGTATCGCTATTGCCGATGCCT
TGTTGGCCCAAGGTGCGGATAAAATATTGCGCGAGTTGTATCAATGA

Protein sequence : 
MADKTIRIATRQSPLALWQAEHVAARLAQAFPGLKTELVKMVTRGDKILDAPLAKVGGKGLFVKELEQGLLEGTADIAVH
SMKDVPVEFPDGLHLAVIMNREDPTDAFVSNRYGSLADLPANARIGTSSLRRQCQIKEKFPHAEILSLRGNVNTRLAKLD
AGEYDAIILASAGLKRLGMGERITAQLSPEESLPAMGQGAIGIECRIDDADIHDYLKVLHDEATSIRVGAERAMNARLNG
GCQVPIAGFAEIRADRLFMRGLVGHPDGSVLYRAEAERPLAEAEQLGIAIADALLAQGADKILRELYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-79 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-79 61