Gene Information

Name : Metme_3947 (Metme_3947)
Accession : YP_004514800.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 4368109 - 4368615 bp
Length : 507 bp
Strand : +
Note : KEGG: mep:MPQ_1757 redoxin domain protein; HAMAP: thiol peroxidase; PFAM: Redoxin

DNA sequence : 
ATGGCTACTATCACCTTTCAAGGCAAACCTATCAACACCATAGGCGATCTGCCGGCTGTCGGCGACAAAGCGCCCGATTT
CAAACTCACCAACCGTAAAATGCAGGACGTAGGTTTGGCCGAGTTTGCCGGCAAACGCAAAGTCATGAATATTGTGCCCA
GCCTGGATACACCGACTTGCGCCACCTCGACCCGTAAATTCAACGAAAAAGCCGCCCATCTCGATAATACCGCGGTATTG
ACGATCTCCGCCGACCTGCCGTTTGCCCAGGCCCGTTTCTGCGAAATAGAGGGCATCAAACATGTCACCGCGCTGTCTAC
GTTCCGTTCCAGCTTTGCCCACGATTATGGCGTGCAGTTACTGGATAGTATTCTGGCCGGACTAACCGCACGTGCCATCG
TGATCATTGATGAAAACGATCAGGTCATTTACACCCAATTGGTCAGCGAAATCGCCGACGAACCGGACTACGTCAGCGCC
CTGGCGGTACTTGCCCATAAGGATTGA

Protein sequence : 
MATITFQGKPINTIGDLPAVGDKAPDFKLTNRKMQDVGLAEFAGKRKVMNIVPSLDTPTCATSTRKFNEKAAHLDNTAVL
TISADLPFAQARFCEIEGIKHVTALSTFRSSFAHDYGVQLLDSILAGLTARAIVIIDENDQVIYTQLVSEIADEPDYVSA
LAVLAHKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-30 41
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 4e-30 41
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-30 41
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 5e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metme_3947 YP_004514800.1 thiol peroxidase VFG0087 Protein 7e-31 41