Gene Information

Name : Metme_3923 (Metme_3923)
Accession : YP_004514776.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4344093 - 4344731 bp
Length : 639 bp
Strand : -
Note : KEGG: spe:Spro_1848 response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal

DNA sequence : 
ATGATTAAGGTTTTGCTGGTTGATGATCATGAGTTGATAAGAAGTGGGGTTGAAGCATTATTGAATGCTTTCGAAGACAT
TTCTGTTGTTGCTGTTTGTGATTGTGGTGAAAAAGCGTTGCAAAGGATAGAGATCGATCTGCCCGACGTGGTGCTGATGG
ACGTCAATATGCCGGGTATGGGCGGGTTCGAGGCGTGTAGGCGAATTTTGCAACGTTTTCCAATGGTCAAAATTGTCGGT
TTGTCGGTACACAACGGCGGGGCAATACCGCAACAGTTATTAAAGCTTGGTGTAGAGGGATTTGTATCCAAGGCATCGCC
GGTCAGTGAAATGGTGGGCGCCATCAGGGCGGTAATGGCCGGAAAGCGCTACTTGTGTCAGGATGTGGCCAGCAACTTGG
TTTTTGAATCGATAGAAGGCGGTGAAGCGTCGCCGTTTTCCCAATTATCGCAGCGCGAAGCGGAAGTGGCGCAGATGATA
TTAAAAGGCAAAGGTATTCAGGAGATTGCCGAAGCGTTGACGCTTAGCGATAAAACCGTCAATACCTACCGCTATCGCTT
ATACGCAAAGTTAAAGATTAAAAACGATGTCGAGCTGACACGGCTGGCGGTTAAACATCATTATTCCGAGCCGATTTAA

Protein sequence : 
MIKVLLVDDHELIRSGVEALLNAFEDISVVAVCDCGEKALQRIEIDLPDVVLMDVNMPGMGGFEACRRILQRFPMVKIVG
LSVHNGGAIPQQLLKLGVEGFVSKASPVSEMVGAIRAVMAGKRYLCQDVASNLVFESIEGGEASPFSQLSQREAEVAQMI
LKGKGIQEIAEALTLSDKTVNTYRYRLYAKLKIKNDVELTRLAVKHHYSEPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-41 45
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-41 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metme_3923 YP_004514776.1 LuxR family transcriptional regulator VFG1889 Protein 6e-45 45