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Name : Metme_3788 (Metme_3788) Accession : YP_004514642.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 4211811 - 4213331 bp Length : 1521 bp Strand : - Note : PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region DNA sequence : ATGGATGTCATACCCGAAATCAGGCGACTGCATTTTGTTGAGCACGTCACCATCAGCGACTTGGCGAAGCAGTTCAAGTT ATCCCGTCCCACGATTCGCAAGCACCTCAAAACGGTCGAAGAGCCCGTCTATCCTACCCGGCAACACCAACCCTATTTGA AACTGGGAGCTTTTATCGAGCAACTGAGGACGTGGTTGGAAACCGATGCGACCTTACCCGGCAAAAAGTGTAAACGCACC GCCCAACGCTTGTATGAATGTCTGCAAGCCGAAGGTTATGTCGGCGGTTACAGTGCGGTGCAGCGTTATGTGAAAGCCTG GAAAGCATCGCGTTCTGCGAGTCCATCGATTAAACAAGCCTTCGTGCCGTTGTTATTTCCGGCGGGTGAGACCTGTCAAT TCGACTGGAGTCATGAAAGAGCCGTCATCGGTGGTGTGGAGCAGGTGGTGAAAGTCGCTCATTTCCGACTAAGTTACAGT CGACAGATGTTCGTAGTGGCTTATCCACGGGAAACACAAGAGATGGTGTTGGACGCCCATAATCAAGCCTTTACCTTCTT CGGCGGTGTGCCGAAACGCATGGTTTACGACAACCTGAAAACGGTGGTGGATGCGATATTCGTGGGCAAGGAACGCCGCT TTAACCGGCGTTTTTTGACCTTGGCCAATCATTACTTGTTTGAGCCGGTGGCTTGCACGCCGGAATCAGGTTGGGAAAAA GGCCAGGTCGAAAATCAGGTCGGCAATATCAGCGAATGGCTATTCACGCCGACACCAAAGTTTGCCGATTTTGCCGAACT CAACGCCTGGTTGGCCCAACGTTGCAGGGAGTTGGCGTCCCGGTCGCATCCCGATCAACCTTCGCGGACCACCGCCGATT GTTTTGCGGAAGAGCAACCGTTGCTGATGCCGGTTAAAGCCATGTTCGATGGCTACGTGGAATCGATGCGACGTGTGAGC TCATTGTGTTTGATCCGCATCGATCGCAATCGTTACAGTGTGCCCGCACAATGGGCTAATCAAGCCGTTTCGGTACGTTT AACGGCTGACCGGGTGCGCATCGTCGCCGAGGGCCAGGTCATTGCCGAGCATGAGCGCCGCTTCGGGCGTGACCAACTGA TCTGCGACCCCTGGCACTATCTACCGGTGCTGGAGAAAAAACCGGGTGCCTTGCGCCACGGTGCGCCGTTTGTGACCTGG GATTTGCCGATACCAATCAAGGTGGTGCGCAACCGGATTCTCAAACAGGATAAAGGCGATAGAGCCTTTGTCGACCTGCT GTTGATGGCCAGAGACCTCGGCGATGCGGGTCTGGATGCCTTGGAAGTGGCTTGCGATCTCACCTTGCAAACCGGCGTCA TCAGCGCGGCCATTGTGCTCAATGAAATGCGCCGTCTCACGGAAGACACCAGGCCTAAAGCCCTGGATGAATCCGTTACC TCATTGCCGACACTGGCTGTCGAACCGCTGGCCGATTGCAGCCGTTACGATGCGTTACGGAGTGCACGTCATGTCCATTG A Protein sequence : MDVIPEIRRLHFVEHVTISDLAKQFKLSRPTIRKHLKTVEEPVYPTRQHQPYLKLGAFIEQLRTWLETDATLPGKKCKRT AQRLYECLQAEGYVGGYSAVQRYVKAWKASRSASPSIKQAFVPLLFPAGETCQFDWSHERAVIGGVEQVVKVAHFRLSYS RQMFVVAYPRETQEMVLDAHNQAFTFFGGVPKRMVYDNLKTVVDAIFVGKERRFNRRFLTLANHYLFEPVACTPESGWEK GQVENQVGNISEWLFTPTPKFADFAELNAWLAQRCRELASRSHPDQPSRTTADCFAEEQPLLMPVKAMFDGYVESMRRVS SLCLIRIDRNRYSVPAQWANQAVSVRLTADRVRIVAEGQVIAEHERRFGRDQLICDPWHYLPVLEKKPGALRHGAPFVTW DLPIPIKVVRNRILKQDKGDRAFVDLLLMARDLGDAGLDALEVACDLTLQTGVISAAIVLNEMRRLTEDTRPKALDESVT SLPTLAVEPLADCSRYDALRSARHVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 2e-164 | 65 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 7e-89 | 43 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 5e-87 | 42 |
