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Name : Metme_3780 (Metme_3780) Accession : YP_004514636.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 4204755 - 4206236 bp Length : 1482 bp Strand : - Note : PFAM: Integrase, catalytic core; KEGG: pol:Bpro_5321 ISPsy20, transposase IstA DNA sequence : GTGCATTACATGTCAATGTTCGCAAAAGTTCGTCGGTTGTTTCATCGCGACCACCTCACTATCAGTGAAATCCAGCGCCG GACCAGTCTGTCGCGTAATACCATCAAAGCCTGGCTCAAGGAAGGCAATCCGGATAACTACAAGTATCCCAAAAGACCTC AGGTAACCAGCAAACTAACGCCATTTATCCGTACCTTGTTACTGGCACTGGAAGTGGATTCAAGGCGAGCTAAGCGGGAT CGACGTACCGCTTTGATGCTGTTTGAAGCGATTAAAAAGGAAGGCTACACCGGTGGTTATTCCATCCTGACCGATTATGT CCGTCATTGGCGGCATGATTCTAGTACATGCAGTCGATCGGCTTCCGTGCCGCTCAAATTCGCATTAGGCGAGGCATTTC AATTCGATTGGAGTGAGGAATGGCTGGTGATCGGTGGTATTCATCGCAAAATCCAGGTCGCCCATACCAAGCTGTGCGCC AGTCGGGCCTTTTTCCTGTCGGCCTATCCCACCCAAACTCAGGAAATGCTGTATGACGCTCACAGCAAAGCGTTCTCGGC GCTGGGCGGCATTGCCAAACGCGGCATATACGACAATATGAAAACTGCGGTCGACAAGGTCACCAAGCGCAATGGCCGTG TCGTCAATGCCCGCTTTTTCGCCATGACGGCACACTATTTGTTCGAGCCTGATTTCTGCAATGTGGCATCAGGCTGGGAA AAAGGCATTGTCGAGAAGAACGTGCAGGATGCCCGGCGTCGGGTGTGGATCGAGGCCAAAACCCAATGCTTTGCTTCGTT CGCAGAGTTGAATGTCTGGCTCGACGCCCGTTGTCGTGCATTATGGTTAGCCGTTGAACATCCGGATTATGCGGGCATTA CGGTGGCTGAAGTGCTGGAGCAAGAACAGATTTACCTGATGCCAATGCCCACCCCGTTTGATGGTTACGTTGAACTGTTG GCGCGTGTTTCCAGCACATGCCTGGTGACGGTGGAACGTAATCACTATTCGGTGCCCTGTCATCTGGCCAACAGCAAGAT CACCCTGCGTCTGCATGCCGATCGACTGGCTATCTGTACCGAGCAGGCTGTCGTGGCCTTGCATCCACGCTTATTGTCCC GTGATCAGGTCAGTTACGACTGGCAACACTATATTCCGTTGATTGAGCGAAAACCGGGCGCCTTGCGCAACGGTGCGCCC TTCGCCGATATGCCGTTATTGTTGATCCAATTACAAACCGCGTTACGGCACCGCGAGCGACAACAAGGTGATCGGATCAT GGCAAAAGTGTTGGCTGCTGTGCCGGGCCATGGTTTAGAAACCGTATTGGCGGCGGTCAAACAGGTCTTGGATTCGGGCG TTACCAGTATCGAACAGGTGCTCAATGCGCTGTCTCGACTGAATGACTTAACCGTCCCGGAACCTGTGGCAACCACGCTA ACACTCAACATAGAGCCGCTTCGCCAATACGGCCCGCTATGA Protein sequence : MHYMSMFAKVRRLFHRDHLTISEIQRRTSLSRNTIKAWLKEGNPDNYKYPKRPQVTSKLTPFIRTLLLALEVDSRRAKRD RRTALMLFEAIKKEGYTGGYSILTDYVRHWRHDSSTCSRSASVPLKFALGEAFQFDWSEEWLVIGGIHRKIQVAHTKLCA SRAFFLSAYPTQTQEMLYDAHSKAFSALGGIAKRGIYDNMKTAVDKVTKRNGRVVNARFFAMTAHYLFEPDFCNVASGWE KGIVEKNVQDARRRVWIEAKTQCFASFAELNVWLDARCRALWLAVEHPDYAGITVAEVLEQEQIYLMPMPTPFDGYVELL ARVSSTCLVTVERNHYSVPCHLANSKITLRLHADRLAICTEQAVVALHPRLLSRDQVSYDWQHYIPLIERKPGALRNGAP FADMPLLLIQLQTALRHRERQQGDRIMAKVLAAVPGHGLETVLAAVKQVLDSGVTSIEQVLNALSRLNDLTVPEPVATTL TLNIEPLRQYGPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 3e-141 | 59 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 6e-97 | 46 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 7e-80 | 42 |
