Gene Information

Name : Metme_3757 (Metme_3757)
Accession : YP_004514614.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3829
EC number : -
Position : 4181796 - 4182767 bp
Length : 972 bp
Strand : +
Note : KEGG: mca:MCA1096 sigma-54-dependent transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core

DNA sequence : 
GTGGATAATTTCAGTTCTATTATTGGTCAATCCCCTGCTCTGGAAGCATTGATTCGTAGTGCCCGCATGGTCGCTGCCAC
CGATGTAACCGTGCTAATCAAAGGAGAAACCGGCACTGGAAAGGAAGTCCTAGCAAGCGCCATTCAAAAGGACAGCCCCA
GAGCCGGCAAACCGTTCGTTACCCTTAACTGCGCCGCATTACCGGAAGGCCTGGTGGAATCCGAGATTTTCGGCCATAAA
AAAGGCGCTTTTACCGGCGCTACTTCAGACAAACAAGGTTTGTTTCAAGCGGCCGATGGCGGCACCCTGTTTTTAGACGA
GATCAACTCTCTCCCGTTAACCATCCAATCCAAGTTACTGCGGTTTTTGGAATCCGGCGAATGTCTCCCTGTCGGCGGCA
CCAAGCCTTATCACGTAAATGTCCGCGTAATTGCGGCCACTAACTCCGATTTAACAACACAAATCGAAGCGGGCGAATTT
CGCCGCGACTTGTACTTTCGCCTGAATGTCGTTCCGCTGGAATTACCTGCCCTGCATGAACGCAGTGAAGATATTGAAAT
TTTGGCTAAACATTTTTTCGCCCACTTTTCCGAAGCACACTCGCTGCAATCGCCTACCTTTAGCAAACAGGCACTTAAAG
CACTTAAAACGCACAAATGGCCGGGCAATGTCCGCGAATTACGTAACTTGTGCGAGCGCTTGAGTATTTTGTTGGCCGGC
AGAGTAATCGAACCGGAAAATTTGCCGCACGAATTCACTCACGGTAAGGAAACAAGCAGCACCGCAACGACCGTAGCAAC
GGATTTCAGATTACCCGAAACCGGCCTGCAACTGGATGCGCTTGAAGCTAATATGATCCACCAAGCCCTGACTCGCACCA
ACGGCAACCGCAGCAAATCAGCCAGACTGCTGGGCATCTCAAGAGACACCCTGCTATACCGCATTCAAAAGCACGGCTTG
GCAACCCATTAA

Protein sequence : 
MDNFSSIIGQSPALEALIRSARMVAATDVTVLIKGETGTGKEVLASAIQKDSPRAGKPFVTLNCAALPEGLVESEIFGHK
KGAFTGATSDKQGLFQAADGGTLFLDEINSLPLTIQSKLLRFLESGECLPVGGTKPYHVNVRVIAATNSDLTTQIEAGEF
RRDLYFRLNVVPLELPALHERSEDIEILAKHFFAHFSEAHSLQSPTFSKQALKALKTHKWPGNVRELRNLCERLSILLAG
RVIEPENLPHEFTHGKETSSTATTVATDFRLPETGLQLDALEANMIHQALTRTNGNRSKSARLLGISRDTLLYRIQKHGL
ATH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAD24684.1 sigma-54-dependent enhancer-binding protein HrpS Virulence Hrp PAI Protein 3e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metme_3757 YP_004514614.1 Fis family transcriptional regulator BAC0467 Protein 4e-63 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metme_3757 YP_004514614.1 Fis family transcriptional regulator VFG1214 Protein 6e-56 42