|
Name : Metme_3340 (Metme_3340) Accession : YP_004514210.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Unknown Product : phosphomethylpyrimidine synthase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3678895 - 3680763 bp Length : 1869 bp Strand : + Note : TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: mca:MCA2710 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC DNA sequence : ATGAGCGCTGTCCGCAATGAAATTACTACCGATACCGGCAGTAGCATAAGAATCGATTCCTACCCCGCCTCGGAAAAAGT CTACATTCCCGGCAGCCGGCCCGATATTCAAGTACCGATGCGTCAAATTAACCTGTCGGACACCCCCGCCACTTTCGGCG CCGAAAAAAACCCGCCGATTTTCGTCTACGACACCTCCGGTGTGTACACCGACCCGAATGTCGATGTCAATCTGCATAAA GGCCTGAGTTCGATACGCGGCGCCTGGATAGATGAGCGCGGCGACACCGAATTACTGAGCGGCCCCACGTCCAAATACGG CCATGAACGCTTGCACGACCCCAAAACAGCCCATCTGCGTTTCGAACTGACCCGCAATCCGCGTCGCGCCAAGGCCGGCC ATAACGTCTCGCAAATGCATTATGCCCGCAAAGGCATCATCACCCCGGAAATGGAATATATCGCCATTCGCGAAAACCAA AATCTGGAAGTCATGCGCGACCGTTATAAAGGCCAACACCCTGGTTTTTCCTACGGCGCCAACATTCAAACCATGATCAC ACCGGAATTCGTCCGCTCGGAAGTCGCCCGCGGCCGCGCCATCATCCCGGCCAACATCAACCACCCCGAACTGGAACCAA TGATCATCGGCCGCAACTTCCTGGTCAAGATCAACGGCAACCTGGGTAACTCGGCGGTAACTTCTTCCATTGAGGAAGAA GTGGAAAAGATGCTGTGGGGCATCCGCTGGGGCGCCGACACCATCATGGATTTATCGACCGGTAAAAATATCCACGAAAC CCGCGAATGGATCTTGCGCAATTCGCCCGTACCGATCGGCACGGTGCCGATATACCAAGCCCTGGAAAAAGTCGACGGCA GAGCCGAAGAACTGACCTGGGAAATCTTCCGCGACACCCTGATCGAACAAGCCGAGCAAGGCGTGGATTATTTCACCATT CACGCCGGCGTGCGCCTGCACCACGTGCCGCTGACCGCCAAGCGCCTGACCGGCATTGTCTCGCGCGGCGGTTCCATCAT GGCCAAATGGTGTCTGGCACATCACACCGAGAGCTTCCTCTACACAAACTTCGAGGAAATCTGCGAGATCATGAAAGCCT ACGACGTGTCGTTCTCGTTAGGCGACGGACTGCGGCCCGGTTCGATTTACGACGCCAACGACGAAGCCCAGTTCGGCGAA CTGGAAACCCTGGGCGAGCTGACCCAAATCGCCTGGAAACACGACGTGCAAACCATGATCGAAGGCCCCGGCCACGTGCC GCTGCAAATGATCAAGGTCAACATGGAAAAACAATTGGAAGACTGCTTCGAAGCACCTTTTTATACCTTGGGTCCGCTGA CCACCGACATTGCCCCCGGCTACGACCACATCACGTCCGCGATCGGCGCCGCCAACATCGGCTGGTACGGCTGTGCGATG CTGTGCTATGTCACCCAGAAAGAACACTTGGGCCTGCCCAACAAACAGGACGTGCGCGAAGGCATCGTCACCTACAAAAT CGCCGCCCACGCGGCCGACTTGGCTAAAGGTCATCCAGGCGCGCAAATCCGCGACAACGCCATGTCCAAGGCCCGCTTCG AATTTCGCTGGGAAGACCAGTTCAATCTGGCGCTGGACCCTGAAAAAGCCCGCTCTTTCCATGACGAGACCCTGCCTAAG GATTCGGCCAAGGTTGCCCATTTCTGTTCGATGTGCGGCCCGCATTTCTGTTCGATGAAAATCAGCCAGGACGTGCGCGA TTACGCGGCGGAAAAAGGCTTACAGGAAGAAGAAGCGCTTAGACAAGGTATGGTTGAAAAGTCAGAGCAATTTTTGAAGG AAGGCGCGGCGATCTATCACGAAGTGTAA Protein sequence : MSAVRNEITTDTGSSIRIDSYPASEKVYIPGSRPDIQVPMRQINLSDTPATFGAEKNPPIFVYDTSGVYTDPNVDVNLHK GLSSIRGAWIDERGDTELLSGPTSKYGHERLHDPKTAHLRFELTRNPRRAKAGHNVSQMHYARKGIITPEMEYIAIRENQ NLEVMRDRYKGQHPGFSYGANIQTMITPEFVRSEVARGRAIIPANINHPELEPMIIGRNFLVKINGNLGNSAVTSSIEEE VEKMLWGIRWGADTIMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVDGRAEELTWEIFRDTLIEQAEQGVDYFTI HAGVRLHHVPLTAKRLTGIVSRGGSIMAKWCLAHHTESFLYTNFEEICEIMKAYDVSFSLGDGLRPGSIYDANDEAQFGE LETLGELTQIAWKHDVQTMIEGPGHVPLQMIKVNMEKQLEDCFEAPFYTLGPLTTDIAPGYDHITSAIGAANIGWYGCAM LCYVTQKEHLGLPNKQDVREGIVTYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPEKARSFHDETLPK DSAKVAHFCSMCGPHFCSMKISQDVRDYAAEKGLQEEEALRQGMVEKSEQFLKEGAAIYHEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 77 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 77 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 73 |
