Gene Information

Name : Metme_0296 (Metme_0296)
Accession : YP_004511245.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 321288 - 321947 bp
Length : 660 bp
Strand : +
Note : KEGG: pap:PSPA7_5497 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region

DNA sequence : 
ATGCGATTGTTATTGGTAGAAGACGACGCCATTCTGGGAGATGGGCTTAAAGCAGGGTTAACCCTGGAAGGCTATGCTGT
GGATTGGTTGACCGATGGGGCGCAAGCCGACGAGGCATTAAAGCTCAATAACTACGATTTAATTGTATTGGATTTGAACC
TGCCGCGGATGGACGGCATGAGCGTGTTAAAGAATTTACGCAAACGCAAGGACAGTACGCCGGTTCTGGTATTGACCGCC
CGAGACGGGGTGTCGGAGCGGGTGGCCGGTTTGGACAACGGCGCTGACGATTTTGTTTGCAAGCCCTTCGATTTGACCGA
GGTATGCGCAAGGCTGCGCGCACTGGCCCGCCGCAATGAAGGCCATGGCTTACCGGTACTGGAACACAAAGGCGTGCGCA
TAGATCCGGCCGCACACCAAGTGTTTTATAACGATGCGGCGGTGGAATTGTCGCAGAAAGAATACGAGATTTTGAATTAT
CTGATGACCCATATTGGCCATGTCACCTCGCGCGCCAGATTGGAAGAAGCGTTATATGCCTGGGGCTCGGAAGTGGAAAG
CAATGCCGTTGAGGTGCATATCCATCATTTGCGCAAAAAACTGGACGCCAATCTAATCCGTACCATACGCGGGGTGGGTT
ATATCGTCGACGAAAACTAG

Protein sequence : 
MRLLLVEDDAILGDGLKAGLTLEGYAVDWLTDGAQADEALKLNNYDLIVLDLNLPRMDGMSVLKNLRKRKDSTPVLVLTA
RDGVSERVAGLDNGADDFVCKPFDLTEVCARLRALARRNEGHGLPVLEHKGVRIDPAAHQVFYNDAAVELSQKEYEILNY
LMTHIGHVTSRARLEEALYAWGSEVESNAVEVHIHHLRKKLDANLIRTIRGVGYIVDEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metme_0296 YP_004511245.1 winged helix family two component transcriptional regulator BAC0487 Protein 5e-38 45
Metme_0296 YP_004511245.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 6e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metme_0296 YP_004511245.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-39 42