|
Name : Metme_2666 (Metme_2666) Accession : YP_004513551.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 2939712 - 2940476 bp Length : 765 bp Strand : - Note : PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ctu:Ctu_15240 3-deoxy-manno-octulosonate cytidylyltransferase DNA sequence : ATGAGCGGGTTTAAAGTCGTCATTCCGGCCCGCTACGCCTCGACCCGCTTGCCCGGCAAACCCTTGCTGGATATAGCCGG CAAGCCGATGATCGCCCACGTCTGCGAACGGGCGCTGGCAGCGGACGCCGCACAGGTGGTGGTGGCGACCGACGACCGGC GTATTTTCGATACGGTTTCCGCTTTGGGAATACAAGTCGCGATGACCGATCCGGACCATCAATCCGGTACCGAGCGCATC GCCGAGGTGGCCGAGAAATTGGGCTGGCAGCCTGACGACATTGTCGTGAACCTGCAAGGCGATGAACCCTTGATTCCGCC GGCCTACATTCGTGACGTGGCGGCGGCATTGGCGGGGCAACAGCAGGCCGGTATCGCCACACTGGCCGCCAAGATTCACG ACGCCGACGAAATATTCAATCCCAACGCGGTGAAAGTGGTCCTGGATAAAAACGGTTACGCGCTGTATTTCAGCCGCGCG CCGATACCGTGGAACCGCGCCAGTTTTCCGGAACACCACGTCATTGGTGACGAAACTCATCCGCATTTCCGCCACATCGG CATGTATGCTTATACGGTCGGTTTTTTGCGTCGCTATTGCAGTTGGCCTGCCTCGCCGCTGGAAGGTGTGGAATCCCTGG AGCAACTGCGGATACTCTGGCACGGCGAAAAAGTGCTGGTAAATATCGTCGAACAAACGCCCGAAGCCGGCGTGGATACC GAAGAGGATTTATGGCGAGTGGCGTTGAGTTTGGGGCAGGTTTAG Protein sequence : MSGFKVVIPARYASTRLPGKPLLDIAGKPMIAHVCERALAADAAQVVVATDDRRIFDTVSALGIQVAMTDPDHQSGTERI AEVAEKLGWQPDDIVVNLQGDEPLIPPAYIRDVAAALAGQQQAGIATLAAKIHDADEIFNPNAVKVVLDKNGYALYFSRA PIPWNRASFPEHHVIGDETHPHFRHIGMYAYTVGFLRRYCSWPASPLEGVESLEQLRILWHGEKVLVNIVEQTPEAGVDT EEDLWRVALSLGQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 9e-28 | 47 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 7e-28 | 47 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 5e-28 | 47 |
