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Name : Metme_2462 (Metme_2462) Accession : YP_004513359.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2711615 - 2713321 bp Length : 1707 bp Strand : - Note : TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: mca:MCA1114 general secretion pathway protein E; SMART: ATPase, AAA+ type, core DNA sequence : ATGGAAACCGTAAATATCCCCGAAAGATACGCTGAATTTTTAGGCCATTTAAAACGTATCGGCAAACTTTCCGATAGCGA TTTGACCAAGGCCCGCCGCATGCAAAAGTCGGCGCAAGACGATTCTTTACCGCAAATGCTGATCAAATTGGGTTTGTGTT CGGATGCGGATGTGGCTGAGACCTTTGCCAATACCCATGGTCTGGAACGCCTGCGCCCGGAAAATTATCCGCCGCAGTCG CCGTTGCAAGAACAGGTATCGCTGCGGTTTTTAAAATACTACCATGTGGTGGGCTTGCAGGCCGACGATGACGGTATCGA TGTGGCGGTGATGGATCCGGAAGACGATTATTTGCCGCAGGCGTTGCAATTGGCGACGGGCAAGCCGATCCGCTTGCATG TCGGTCAATTGTCCGATATCGATGCGGCCCTGGAAATTCAATACGGCGACGGCAAATCGCAAATGGACAAGCTGATGGAC GGCTTGAACGTGGAGGAAGAGAGTAACGAAGATCTGGAACATTTAAAGGATTTGGCCAGCGAGGCGCCGATTATCCGCAT GGTGAATTTTATTCTGCAAAAAGCCGTGGAGAGCCGGGCATCGGACGTGCATATCGAACCGTTCGAACAAAGTCTGAAGG TGCGTTTGCGCATCGACGGCGTTTTGCAGGACATCGATTCGCCGCCGGTGGCATCTACCGCCGCCGTGTTGTCGCGCATC AAAATTATGGCTAAATTGAATATCGCCGAACGCCGGCTGCCGCAGGATGGTCGCATCAAATTGCAAATGATAGGCAAGGA GTTGGATTTGCGGGTTTCCACCATACCGACCTTGTACGGCGAAAGCGTGGTAATCCGTTTGCTGGACAAGGAAAACGCAG TACTGGATTTTGCCGCCCTGGGCTTCGTCGGCCGGCAGGCGGAAAATTTTATGGAAGTATTGGCGCAACCGCACGGCATT ATTCTGATTACCGGTCCCACCGGCAGCGGTAAATCCACCAGTTTGTACGCGGCGTTGAAGCAGCTCAACACCTCCGAACG CAAGATCATTACCGTGGAAGACCCGGTCGAGTATCAATTGGAAGGCATTAATCAGATTCAGGCCAAACCGCAAATCGGCC TGACTTTCGCCTCGGCGCTGCGCTCCATCGTGCGGCAGGACCCGGACGTGATTATGATAGGCGAGATGCGCGATCTGGAA ACCGCCAAGATCGCCGTGCAATCGGCCCTGACCGGCCACTTGGTGCTGTCCACTCTGCATACCAACGATGCCGCCGCCGG CATTACCCGGCTGCAGGACATGGGGCTGGAAGAGTATCTGCTCAGCTCCACCATCAACGGCATTCTGGCGCAGCGCTTGG TCAGAAAACTTTGTCCGGCCTGTAAGCAGTCTTATCCGGCTTCGGATACGCTGATAGAGGAAATGCAACTGCGTCGCTGG CAACCCGATGGCGAAATTCTGCTGCATAAGCCGGTCGGCTGCGCGGTTTGCAACGGCATCGGCTACAAAGGCCGGTTGGC GATTATCGAATTTTTGACCATGAGCGACAGCATACGCAAACAGATCATGAAGCATGAAGAGGCGTATGTGATTCAACAAC AAGCTATCCAGGAAGGTATGCACACCATGTATGAAGACGGTATAGGCAAGGCCTTGCAAGGGATTACCACCTTGGAGGAA GTGTTACGGGTGACGACCGAGGCTTGA Protein sequence : METVNIPERYAEFLGHLKRIGKLSDSDLTKARRMQKSAQDDSLPQMLIKLGLCSDADVAETFANTHGLERLRPENYPPQS PLQEQVSLRFLKYYHVVGLQADDDGIDVAVMDPEDDYLPQALQLATGKPIRLHVGQLSDIDAALEIQYGDGKSQMDKLMD GLNVEEESNEDLEHLKDLASEAPIIRMVNFILQKAVESRASDVHIEPFEQSLKVRLRIDGVLQDIDSPPVASTAAVLSRI KIMAKLNIAERRLPQDGRIKLQMIGKELDLRVSTIPTLYGESVVIRLLDKENAVLDFAALGFVGRQAENFMEVLAQPHGI ILITGPTGSGKSTSLYAALKQLNTSERKIITVEDPVEYQLEGINQIQAKPQIGLTFASALRSIVRQDPDVIMIGEMRDLE TAKIAVQSALTGHLVLSTLHTNDAAAGITRLQDMGLEEYLLSSTINGILAQRLVRKLCPACKQSYPASDTLIEEMQLRRW QPDGEILLHKPVGCAVCNGIGYKGRLAIIEFLTMSDSIRKQIMKHEEAYVIQQQAIQEGMHTMYEDGIGKALQGITTLEE VLRVTTEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-91 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-91 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Metme_2462 | YP_004513359.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-91 | 47 |
| Metme_2462 | YP_004513359.1 | general secretory pathway protein E | VFG2048 | Protein | 8e-92 | 46 |
| Metme_2462 | YP_004513359.1 | general secretory pathway protein E | VFG1880 | Protein | 5e-84 | 44 |
