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Name : Metme_2001 (Metme_2001) Accession : YP_004512911.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Unknown Product : lytic transglycosylase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 2198384 - 2198950 bp Length : 567 bp Strand : + Note : PFAM: Lytic transglycosylase-like, catalytic; KEGG: noc:Noc_0630 lytic transglycosylase, catalytic DNA sequence : ATGGCTGTCTTCAAATCTATAGGCTGCAATCGGTTTGGCGTCGTAATCGCAACCTTGCTTTGTCACGGAATTCCCACAAG CTGGGCCAAGGATAGCATCCCGGCTAATTATCGGCACATCGCCGCTGAACACCGGCTGCCGGCCGATGTCTTGTATAGCG TCGCCATCACCGAAAGTGGCCAAAAGCTGCGTAGCGGCAAGTTGAGACCCTGGCCGTGGACATTGAATGTGGCCGGCAAA GCGCTGCGTTATCCAACTCGGCTGGCTGCCTGGCGAGGTCTGACGGAATATCTGCAACAAGGTGTCGATTTAATCGACAT CGGCATCATGCAAGTTAATTGGCGTTATCACCGGGAACAATTAGGTTCGCCCTGGCAAGCACTGGAACCCTTTCACAATA CCCGTACCGGCGCCCGGATACTCAAACGCGAACACCAAAAAACCGGCACCTGGAAAACGGCCATTGGTCATTATCATTCA CCGGGTAGCAAACCCAAGCAGCAAGAACGTGCCCAACACTATACGCAACGGGTAGTCAAACGCATGGCACAGTTACGAAG TGAATAA Protein sequence : MAVFKSIGCNRFGVVIATLLCHGIPTSWAKDSIPANYRHIAAEHRLPADVLYSVAITESGQKLRSGKLRPWPWTLNVAGK ALRYPTRLAAWRGLTEYLQQGVDLIDIGIMQVNWRYHREQLGSPWQALEPFHNTRTGARILKREHQKTGTWKTAIGHYHS PGSKPKQQERAQHYTQRVVKRMAQLRSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api25 | CAF28499.1 | conserved hypothetical protein | Not tested | YAPI | Protein | 1e-20 | 42 |
| YpsIP31758_3720 | YP_001402674.1 | transglycosylase | Not tested | YAPI | Protein | 2e-20 | 42 |
| STY4559 | NP_458645.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-17 | 41 |
| t4257 | NP_807855.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-17 | 41 |
| PMI2591 | YP_002152310.1 | lytic transglycosylase | Not tested | Not named | Protein | 9e-25 | 41 |
