Gene Information

Name : Metme_1984 (Metme_1984)
Accession : YP_004512894.1
Strain : Methylomonas methanica MC09
Genome accession: NC_015572
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2184756 - 2185574 bp
Length : 819 bp
Strand : +
Note : PFAM: Protein of unknown function DUF932; KEGG: ajs:Ajs_4210 hypothetical protein

DNA sequence :
ATGTTAGCTTCACGTTTTAGATCGGGTCAGTTGATCCGCTCAACTTTACCCTTGTCCGATGAGCAATTGCGCAATGTTGT
GCCGTCGATTTATGCCGGCGACGCCCATGCCTCGCGGTCCGATCGCTATACCCACATTCCGACCAGCGTGGTGTTAAACG
CACTGAAAAAAGAAGGCTTCCAGCCGTTTATGGCGATTCAAGCCCGCGTGCGTGACGATACCCGGCACGGTTTTGCCAAA
CACATGATTCGGATGCGCCACGCCAGCCAAATAGAAATGCAGGATGCCGTCAACGAAATCATCTTGTTGAATTCGCATGA
CGGCTCCAGTTCCTATCAAATGCTGGCCGGCAGCTTTCGGTTCGTGTGCCAAAACGGCATGGTCTGCGGCGATCAATACC
ACGATATCAGAGTCCGCCACTGCGGCAATGTGGTGGACAACGTCATCGAGGGGGCTTATGAAGTCCTCGATAACTTTGAG
CGCATTACGGCCTCCAAAGCCGATATGTCAGCCTTGCCATTATCCGAAGCCGAGCAACTGGCCTTTGCCAAAGCAGCATT
GCCTTTGCGCTTTGGCGAAACCGATGCGCAGCCGGCAGAACAAACGGTGCTGCGGCGCAGGCGATCGGCTGATGACCGAA
ACGATCTATGGACGACCTTCAATGTGGTCCAGGAAAATTTGATCAAAGGGGGGCTGCCGCGTGTTAACCGCCAAGGCAGA
GTCTCCAGGACCCGACAGATCAACGGCATCGATGGCGACGTCCGTTTGAACAAGGCGCTTTGGACTTTGGCGGAAGCCAT
GAAAGCGCTGAAAGCTTAA

Protein sequence :
MLASRFRSGQLIRSTLPLSDEQLRNVVPSIYAGDAHASRSDRYTHIPTSVVLNALKKEGFQPFMAIQARVRDDTRHGFAK
HMIRMRHASQIEMQDAVNEIILLNSHDGSSSYQMLAGSFRFVCQNGMVCGDQYHDIRVRHCGNVVDNVIEGAYEVLDNFE
RITASKADMSALPLSEAEQLAFAKAALPLRFGETDAQPAEQTVLRRRRSADDRNDLWTTFNVVQENLIKGGLPRVNRQGR
VSRTRQINGIDGDVRLNKALWTLAEAMKALKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-74 57
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 6e-75 56
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 7e-64 52
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 8e-64 50
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-63 50
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 8e-64 50
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 9e-64 50
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-64 50
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 9e-64 50
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 5e-65 50
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-61 50
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 5e-62 50
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-62 50
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 5e-62 50
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 8e-64 50
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-63 50
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 1e-61 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metme_1984 YP_004512894.1 hypothetical protein VFG1526 Protein 8e-63 50
Metme_1984 YP_004512894.1 hypothetical protein VFG1615 Protein 6e-62 50
Metme_1984 YP_004512894.1 hypothetical protein VFG0658 Protein 4e-64 50
Metme_1984 YP_004512894.1 hypothetical protein VFG1676 Protein 8e-62 49