|
Name : Metme_1941 (Metme_1941) Accession : YP_004512854.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 2137721 - 2139265 bp Length : 1545 bp Strand : + Note : KEGG: tau:Tola_1606 integrase catalytic region; manually curated; PFAM: Integrase, catalytic core DNA sequence : ATGTCAGCAAAGAGAACAAGCATGCGAAATTTAAGAGAAGTTCTTAGGCTGAGCTACAGCGCCGGATTAAGCATCCGGAA AATCAGTGCCAGTACCAAAATCAGTGTCGGCAGCATTCAAAACATCTTAAAAATGGCCGAGCAATTAAAGCTTGCTTGGC CACTGCCGCACGATTGGGACGATCAAACCTTAGCCCTGAAGTTTTATCCCCGTTCGGATGCCAAGCCGTCATCCAAATAC CAGGAGCCGGTATGGTCAGAACTCCATCTGGAGTTGAAGAAAAAGGGTGTCACCAAACAATTACTTTGGGAAGAATATAC TCAGCAGTATCCGAACCGGTGCTATAGCTACTCGCAGTTCTGCGCCCGCTACGCCGATTGGTTGAAGAAGCAAAAACGGT CGATGCGGCAAACCCATCGTGCCGGCGAAAAGTTGTTTATCGATTATGCCGGGCCCACGATACCGGTGGTGTGCGCAGCC AGCGGCGAAATCCGCACCGCGCAAATCTTTGTGGCGGTGTTGGGTGCATCCAGTTACACCTATGCCGAGGCCACTTTGAG TCAGAGCCTGGCGGATTGGTTGGGCAGCCATGTGCGCGCCTTTGAGTTCTTTGGCGGAACCCCGGTGATGCTGATTCCCG ACAATTTAAAGAGCGGGGTCAATAAAGCCTGTCGTTACGAGCCTGAACTCAATCCCAGCTATCAACAACTGGCCGCTCAT TACGGGGTGGCCGTGGTGCCTGCCCGGCCCTATAAACCCAAAGACAAGGCCAAAGCCGAGATTGGCGTTCAGGTGGTGGA GCGCTGGATCATGGCCAAACTCCGCCATCAGACCTTCTTCTCTCTGGCAGAGCTGAATCAGTGTATCCGTGCCTTACTGA TGGATTTGAATCAAAAGCCTTTCAAGCAATGGCCCGGCAACCGTCGGCAATGGTTCGAAAAACTGGATCAACCGGCGCTG TCGCCCTTGCCCAAGTATGCTTATCAGTACACCGACATCAAAGCCGCCCGTGTGAATATCGACTACCACATTATCTATGA TCAGCATCTTTACTCGGTGCCGCATCCCTGTGTCGGCGAGCAGGTTGAACTGCATGCCGGCGACCCGTTGATTGAGATCT ATTTTCAAGGCAAACGCATTGCAAGCCATGTGCGCAAGTTCTATCCCGGCACCACTACCGATCCTGGGCACATGCCGGAA CGCCATGCCCGGCATCAGCAATGGACGCCAGGACGCTTAATGAATTGGGCACAAGCGATCGGACCTGATGTGCTGCAGTG GGTCAAGGCGCAGTTACAGCGCAAAGCCCATCCTGAACAAGCCTACCGGGTCTGTCTGGGTTTATTGAGCCTGAGCCGAA CCTACCCCGCCGAACGCTTGAATCAAGCCTGTGCGCTGGCCAACCAACAAGCTCTGTTTAAATTGAAGAACGTCAAAACC ATTTTGCAAAGCAACCTGGACAAGTTGCCGTCGTCGGTTCCGGTACAGTCATCTTTATTGCCGCAGGATCATGAAAACAT CCGGGGCGCCCACAGTTTTCATTAA Protein sequence : MSAKRTSMRNLREVLRLSYSAGLSIRKISASTKISVGSIQNILKMAEQLKLAWPLPHDWDDQTLALKFYPRSDAKPSSKY QEPVWSELHLELKKKGVTKQLLWEEYTQQYPNRCYSYSQFCARYADWLKKQKRSMRQTHRAGEKLFIDYAGPTIPVVCAA SGEIRTAQIFVAVLGASSYTYAEATLSQSLADWLGSHVRAFEFFGGTPVMLIPDNLKSGVNKACRYEPELNPSYQQLAAH YGVAVVPARPYKPKDKAKAEIGVQVVERWIMAKLRHQTFFSLAELNQCIRALLMDLNQKPFKQWPGNRRQWFEKLDQPAL SPLPKYAYQYTDIKAARVNIDYHIIYDQHLYSVPHPCVGEQVELHAGDPLIEIYFQGKRIASHVRKFYPGTTTDPGHMPE RHARHQQWTPGRLMNWAQAIGPDVLQWVKAQLQRKAHPEQAYRVCLGLLSLSRTYPAERLNQACALANQQALFKLKNVKT ILQSNLDKLPSSVPVQSSLLPQDHENIRGAHSFH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 3e-118 | 50 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 2e-113 | 50 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 8e-114 | 50 |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 1e-113 | 50 |
