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Name : Metme_1198 (Metme_1198) Accession : YP_004512126.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1300182 - 1302011 bp Length : 1830 bp Strand : + Note : PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: mca:MCA0903 polysaccharide biosynthesis protein DNA sequence : ATGACGATCAGATTTCGCTCCCGCACCTCTATATTCCTGCATGATTTGATGATGGTGCCGCTGGCTTGGCTGGGTGCCTA TTGGTTGCGCTTTAACCTGGACGAGATTCCCGACGAATTTTTTTATTCGGCTTTATTGTTTCTGCCGGTTGTTATCGGCA TACAGGTATCCGCTTTTTGGACCTTCGGTTTGTATCGCGGTGTTTGGCGATTTTCGTCAATGCCCGATTTGATCAGGATC GCAAAATCTGTCTCCGCGGGAATTTTTTTCATTACAGGGATTCTGTTTCTTTACAACCGGTTAGAAGGCTTACCCCGCTC TGTAATACCGCTTTATATGTTGATTTTATTGGCATTATTATGTGTTCCACGGTTTGTGTACCGATTTTGGAAGGAGCGGG ATATTGTTGAGCGGATTGGCTTGCGGGCATTGATTGTCGGCGCCGGTGCGGCAGGAGACATGCTGGTGCGCGACTTGTTA TCCAATCCGAACAGCGGCTATATACCTGTCCTATTTGCCGATGATCAGGCCGGTAAATTAAATCGGGAAATTCGTGGGAT CCGCGTGGCCGGCCGGATCGAGCAAATTCCTGCGTTAATCGAGCAGTGGGAAGTCGAAGTGGTGTTGATTGCCATACCTT CCGCGACCGACACGCAGATGCGCCGCATAGTGGAAATTTGCGAAAGCAGTAAGGTACGATTTCAAACCCTGCCATCGGTT AAGGAATTGCTTAGCGGCGCGGTGACCAAAGCCAGTCTTAGAAATGTTTCGATAACGGATATTCTGGGCCGCGATCCCGT GTGGTTGGATTGGCACGGCATTCAAGCCAGTCTGCATGACAAAACCATATTGGTAACGGGCGGCGGCGGGTCTATTGGTT CGGAATTGTGTAAGCAATTGGCCAAAATTCAACCCCGCAACCTGATTGTCTTCGATCAGTGCGAGTTTAATTTATACAAA ATCGATGCGGAATTATCACGGCATTATCCGCAGCTACCGCATTTGGCAATTTTGGGCGATGTGACTCAGGCATTAGCGGT ACAGCAGATTATCGACTCGCAAAAACCGGACGTGATTTTTCATGCCGCGGCTTACAAACATGTGCCGCTATTGGAGGGGC AAGCAAGAGAAGCGGTGCATAATAATTTGATCGGCACCAAAATTGTTGCCGAGGCAGCTATCGCTTCCAATGTTGCACGA TTTGTACTCATTTCGACCGACAAAGCGGTAAATCCCACTAATGTGATGGGTGCCACCAAACGAGCGGCGGAAATTTTGTG CCAGAATCTGGATAAAGCCAGTAATACTCGGTTTACTACTGTACGGTTCGGGAATGTGTTGGATTCCGCTGGCAGTGTAG TGCCGTTGTTTCGCGAGCAGATTCGTGCCGGCGGACCGGTTACCGTTACACATCCCGATATTACCCGCTACTTCATGACC ATTCCCGAGGCCTGCCAATTGATTATGTTGGCTGAAACAGTGGGCAAGGGTGGAGAAGTGTTTGTGCTGGACATGGGGGA ACCGGTCAAAATTGTGTATCTCGCCGAGCAAATGATTCGACTGAGCGGAAAAGTTCCCGGCAAGGATATTCATATTGAAT TTGTCGGTTTGCGGCCGGGCGAAAAATTGTATGAAGAACTATTCCACCACGAAGAACAGCTAATGGAAACCGGCTATAGC AAATTACGGTTGGCCCAAGCGAGAGTTTACGAAGATGATGTTTGGTCGAGTAACATTCGGGCGTTGACACAAGCGTGTCA AGAACCGGGACGGCACGACATTGTGCAGCTATTAAAACAATTAGTACCCGAATTCAAATCGGACGTTTAA Protein sequence : MTIRFRSRTSIFLHDLMMVPLAWLGAYWLRFNLDEIPDEFFYSALLFLPVVIGIQVSAFWTFGLYRGVWRFSSMPDLIRI AKSVSAGIFFITGILFLYNRLEGLPRSVIPLYMLILLALLCVPRFVYRFWKERDIVERIGLRALIVGAGAAGDMLVRDLL SNPNSGYIPVLFADDQAGKLNREIRGIRVAGRIEQIPALIEQWEVEVVLIAIPSATDTQMRRIVEICESSKVRFQTLPSV KELLSGAVTKASLRNVSITDILGRDPVWLDWHGIQASLHDKTILVTGGGGSIGSELCKQLAKIQPRNLIVFDQCEFNLYK IDAELSRHYPQLPHLAILGDVTQALAVQQIIDSQKPDVIFHAAAYKHVPLLEGQAREAVHNNLIGTKIVAEAAIASNVAR FVLISTDKAVNPTNVMGATKRAAEILCQNLDKASNTRFTTVRFGNVLDSAGSVVPLFREQIRAGGPVTVTHPDITRYFMT IPEACQLIMLAETVGKGGEVFVLDMGEPVKIVYLAEQMIRLSGKVPGKDIHIEFVGLRPGEKLYEELFHHEEQLMETGYS KLRLAQARVYEDDVWSSNIRALTQACQEPGRHDIVQLLKQLVPEFKSDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-92 | 47 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-90 | 44 |
