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Name : Metme_1008 (Metme_1008) Accession : YP_004511944.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 1089950 - 1091509 bp Length : 1560 bp Strand : - Note : PFAM: Integrase, catalytic core; KEGG: hna:Hneap_1227 integrase catalytic region DNA sequence : ATGCCCGGCTTTTTGCCGGAGAACCCTGGAGTGATAAAAATGGATGTCATACCCGAAATCAGGCGACTGCATTTTGTTGA GCACGTCACCATCAGCGACTTGGCGAAGCAGTTCAAGTTATCCCGTCCCACGATTCGCAAGCACCTCAAGACGGTCGAAG AGCCCGTCTATCCTACCCGGCAACACCAACCCTATTTGAAACTGGGAGCTTTTATCGAGCAACTGAGGACGTGGTTGGAA ACCGATGCGACCTTACCCGGCAAAAAGTGTAAACGCACCGCCCAACGCTTGTATGAATGTCTGCAAGCCGAAGGTTATGT CGGCGGTTACAGTGCGGTGCAGCGTTATGTGAAAGCCTGGAAAGCATCGCGTTCTGCGAGTCCATCGATTAAACAAGCCT TCGTGCCGTTGTTATTTCCGGCGGGTGAGACCTGTCAATTCGACTGGAGTCATGAAAGAGCCGTCATCGGTGGTGTGGAG CAGGTGGTGAAAGTCGCTCATTTCCGACTAAGTTACAGTCGACAGATGTTCGTAGTGGTTTATCCACGGGAAACACAAGA GATGGTGTTGGACGCCCATAATCAAGCCTTTACCTTCTTCGGCGGTGTACCGAAACGCATGGTTTACGACAACCTGAAAA CGGTGGTGGATGCGATATTCGTGGGCAAGGAACGCCGCTTTAACCGGCGTTTTTTGACCTTGGCCAATCATTACTTGTTT GAGCCGGTGGCTTGCACGCCGGAATCAGGTTGGGAAAAAGGCCAGGTCGAAAATCAGGTCGGCAATATCAGCGAATGGCT ATTCACGCCGACACCAAAGTTTGCCGATTTTGCCGAACTCAACGCCTGGTTGGCCCAACGTTGCAGGGAGTTGGCGTCCC GGTCGCATCCCGATCAACCTTCGCGGACCACCGCCGATTGTTTTGCGGAAGAGCAACCGTTGCTGATGCCGGTTAAAGCC ATGTTCGATGGCTACGTGGAATCGATGCGACGTGTGAGCTCATTGTGTTTGATCCGCATCGATCGCAATCGTTACAGTGT GCCCGCACAATGGGCTAATCAAGCCGTTTCGGTACGTTTAACGGCTGACCGGGTGCGCATCGTCGCCGAGGGCCAGGTCA TTGCCGAGCATGAGCGCCGCTTCGGGCGTGACCAACTGATCTGCGACCCCTGGCACTATCTACCGGTGCTGGAGAAAAAA CCGGGTGCCTTGCGCCACGGTGCGCCGTTTGTGACCTGGGATTTGCCGATACCAATCAAGGTGGTGCGCAACCGGATTCT CAAACAGGATAAAGGCGATAGAGCCTTTGTCGACCTGCTGTTGATGGCCAGAGACCTCGGCGATGCGGGTCTGGATGCCT TGGAAGTGGCTTGCGATCTCACCTTGCAAACCGGCGTCATCAGCGCGGCCATTGTGCTCAATGAAATGCGCCGTCTCACG GAAGACACCAGGCCTAAAGCCCTGGATGAATCCGTTACCTCATTGCCGACACTGGCTGTCGAACCGCTGGCCGATTGCAG CCGTTACGATGCGTTACGGAGTGCACGTCATGTCCATTGA Protein sequence : MPGFLPENPGVIKMDVIPEIRRLHFVEHVTISDLAKQFKLSRPTIRKHLKTVEEPVYPTRQHQPYLKLGAFIEQLRTWLE TDATLPGKKCKRTAQRLYECLQAEGYVGGYSAVQRYVKAWKASRSASPSIKQAFVPLLFPAGETCQFDWSHERAVIGGVE QVVKVAHFRLSYSRQMFVVVYPRETQEMVLDAHNQAFTFFGGVPKRMVYDNLKTVVDAIFVGKERRFNRRFLTLANHYLF EPVACTPESGWEKGQVENQVGNISEWLFTPTPKFADFAELNAWLAQRCRELASRSHPDQPSRTTADCFAEEQPLLMPVKA MFDGYVESMRRVSSLCLIRIDRNRYSVPAQWANQAVSVRLTADRVRIVAEGQVIAEHERRFGRDQLICDPWHYLPVLEKK PGALRHGAPFVTWDLPIPIKVVRNRILKQDKGDRAFVDLLLMARDLGDAGLDALEVACDLTLQTGVISAAIVLNEMRRLT EDTRPKALDESVTSLPTLAVEPLADCSRYDALRSARHVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 8e-165 | 65 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 1e-88 | 43 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 1e-87 | 42 |
