Gene Information

Name : PGTDC60_0571 (PGTDC60_0571)
Accession : YP_004509306.1
Strain : Porphyromonas gingivalis TDC60
Genome accession: NC_015571
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 596980 - 597528 bp
Length : 549 bp
Strand : +
Note : similar to nr, gi|34541358|ref|NP_905837.1| thiol peroxidase [Porphyromonas gingivalis W83] thiol peroxidase [Porphyromonas gingivalis W83], percent identity 100 in 179 aa, BLASTP E(): 1e-94

DNA sequence : 
ATGATTACAATGAGTCTAAAAATATTTCTAACAGCATTATCAGTTATGGCAACAGTAACATTACAAGGCAAAATCAACAT
CAATACTAATGGACAGCTCCCGGGTGTAGGTTCAGTTGCTCCCGACTTCAAAGCCGTGAGGGCTGATTTGAGCGAAGTAT
CGCTCTCGGAATTCAAAGGAAAAAGAGTGGTAATCAACATATTTCCCAGTATAGATACAGGTGTCTGTGCAGCCAGCGTA
CGCCGTTTCAATCAGGAAGCATCTTCTTTGGACAATACGGTAGTACTCTGCCTTTCCAAGGACCTGCCTTTTGCACAGGC
TCGCTTCTGTGGTGCCGAAGGTCTGGACAAGGTTATCACCGTTTCAGCTTTCCGCTGCGACTGCTTTGAGAAGGGTTATG
GTCTGCTGATGACCGATGGCCCTTTGAAAGGTCTCTTGGCTCGTGCCGTCGTTGTAGTGGACGAAAACGGTAAGATCATT
TACGAAGAGCTTGTTCCCGAGATCACTCAAGAGCCGAATTATGAAGCTGCTATCGCTGCACTGAAGTAA

Protein sequence : 
MITMSLKIFLTALSVMATVTLQGKININTNGQLPGVGSVAPDFKAVRADLSEVSLSEFKGKRVVINIFPSIDTGVCAASV
RRFNQEASSLDNTVVLCLSKDLPFAQARFCGAEGLDKVITVSAFRCDCFEKGYGLLMTDGPLKGLLARAVVVVDENGKII
YEELVPEITQEPNYEAAIAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 4e-30 44
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 6e-30 44
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-30 44
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 8e-30 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PGTDC60_0571 YP_004509306.1 thiol peroxidase VFG0087 Protein 1e-30 44